RNA–Protein interactions for RNA: ENST00000491668.1

SEC61A1-206, Transcript of Sec61 translocon alpha 1 subunit, humanhuman

TSL 4

Gene SEC61A1, Length 558 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1-206ENST00000491668 GPD2P43304 727 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 USP39Q53GS9 565 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 MSANTD2Q6P1R3 559 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 DENND1BQ6P3S1 775 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 TRIM65Q6PJ69 517 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 SIX6OS1Q8N1H7 587 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 CPXM2Q8N436 756 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 NETO1Q8TDF5 533 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 PLD4Q96BZ4 506 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 ERLEC1Q96DZ1 483 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 PIWIL1Q96J94 861 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 XPO6Q96QU8 1125 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 GABRG3Q99928 467 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 TRIM5Q9C035 493 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 DCLK3Q9C098 648 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 UBE2TQ9NPD8 197 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 RTN4Q9NQC3 1192 aaKnown RBP13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 CYTH4Q9UIA0 394 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 STOML2Q9UJZ1 356 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 AJAP1Q9UKB5 411 aaPredicted RBP13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 STRIP2Q9ULQ0 834 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 ZNF510Q9Y2H8 683 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC27A6Q9Y2P4 619 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 NUP205Q92621 2012 aa13.25□□□□□ -0.29
SEC61A1-206ENST00000491668 A0A1B0GTH6 734 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 TM4SF5O14894 197 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 IGLV3-27P01718 113 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 HOXB2P14652 356 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 GBP1P32455 592 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 CHKAP35790 457 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 SGSHP51688 502 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 SYCP1Q15431 976 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 ELF2Q15723 593 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 PREPLQ4J6C6 727 aaPredicted RBP13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 TMEM215Q68D42 235 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 DPY19L2P1Q6NXN4 242 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 SCUBE3Q8IX30 993 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 NEK11Q8NG66 645 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 IRGQQ8WZA9 623 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 NAP1L5Q96NT1 182 aaPredicted RBP13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 RTKNQ9BST9 563 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 LSM14BQ9BX40 385 aaKnown RBP13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC6A17Q9H1V8 727 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 POLMQ9NP87 494 aaPredicted RBP13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 CACNA2D2Q9NY47 1150 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 HBS1LQ9Y450 684 aaKnown RBP13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 RAD54BQ9Y620 910 aa13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 TNRC6BQ9UPQ9 1833 aaKnown RBP13.24□□□□□ -0.29
SEC61A1-206ENST00000491668 EPG5Q9HCE0 2579 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 GOLGA6L3A6NEY3 463 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 PATE3B3GLJ2 98 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 ALDH1A2O94788 518 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 RHOBTB1O94844 696 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 KRT5P13647 590 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 SDHBP21912 280 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 PON1P27169 355 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 HOXD9P28356 352 aaPredicted RBP13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 PTGER3P43115 390 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 CREB5Q02930 508 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 ENPP2Q13822 863 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 STILQ15468 1287 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 APTXQ7Z2E3 356 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 TRMT11Q7Z4G4 463 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 CHPFQ8IZ52 775 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 IPO4Q8TEX9 1081 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 RNF139Q8WU17 664 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 MYEOVQ96EZ4 313 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 HSFY1Q96LI6 401 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 SLC4A5Q9BY07 1137 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 XPO4Q9C0E2 1151 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 MIS12Q9H081 205 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 SIX2Q9NPC8 291 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 CD93Q9NPY3 652 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 VPS45Q9NRW7 570 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 ABCC13Q9NSE7 274 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 FAM207AQ9NSI2 230 aaPredicted RBP13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 OLA1Q9NTK5 396 aaKnown RBP13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 CALCOCO1Q9P1Z2 691 aa13.23□□□□□ -0.29
SEC61A1-206ENST00000491668 ACACBO00763 2458 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 TEX33O43247 280 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 PAPSS1O43252 624 aaPredicted RBP13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 TSPAN3O60637 253 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 LTFP02788 710 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 NDUFV2P19404 249 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 LIMK1P53667 647 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 NR1I3Q14994 352 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 FAM133BQ5BKY9 247 aaKnown RBP13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 ADGRF1Q5T601 910 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 RNF43Q68DV7 783 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 NUDT18Q6ZVK8 323 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 TMEFF1Q8IYR6 380 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 WDTC1Q8N5D0 677 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 ZNF606Q8WXB4 792 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 SORCS1Q8WY21 1168 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 FAM81BQ96LP2 452 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 ERGIC2Q96RQ1 377 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 TMEM74BQ9NUR3 256 aa13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 BCCIPQ9P287 314 aaKnown RBP eCLIP13.22□□□□□ -0.29
SEC61A1-206ENST00000491668 THAP10Q9P2Z0 257 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms