RNA–Protein interactions for RNA: ENST00000491319.2

SMPD4-220, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 593 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-220ENST00000491319 PPM1KQ8N3J5 372 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 RBBP8NLQ8NC74 664 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-220ENST00000491319 OR2I1PQ8NGU4 316 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 CEP76Q8TAP6 659 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 RNF139Q8WU17 664 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 KCTD13Q8WZ19 329 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 DHTKD1Q96HY7 919 aaPredicted RBP16.41■□□□□ 0.22
SMPD4-220ENST00000491319 CEP63Q96MT8 703 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 GTPBP4Q9BZE4 634 aaKnown RBP16.41■□□□□ 0.22
SMPD4-220ENST00000491319 CIPCQ9C0C6 399 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 PRDM16Q9HAZ2 1276 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 CNGB3Q9NQW8 809 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 ELOVL2Q9NXB9 296 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 HBS1LQ9Y450 684 aaKnown RBP16.41■□□□□ 0.22
SMPD4-220ENST00000491319 PCDHB4Q9Y5E5 795 aa16.41■□□□□ 0.22
SMPD4-220ENST00000491319 M0QYV0 167 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 RNF225M0QZC1 329 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-220ENST00000491319 NPC1O15118 1278 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 PAEPP09466 180 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 SPINK2P20155 84 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 BMP6P22004 513 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 BRD2P25440 801 aaKnown RBP16.4■□□□□ 0.22
SMPD4-220ENST00000491319 CD6P30203 668 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 ATXN3P54252 364 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-220ENST00000491319 EIF4HQ15056 248 aaKnown RBP16.4■□□□□ 0.22
SMPD4-220ENST00000491319 MPPE1Q53F39 396 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 TTI2Q6NXR4 508 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 PMF1Q6P1K2 205 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 LCLAT1Q6UWP7 414 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 RABEPKQ7Z6M1 372 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 RGL4Q8IZJ4 473 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 LMO3Q8TAP4 145 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 CLEC4CQ8WTT0 213 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 ZNF419Q96HQ0 510 aaPredicted RBP16.4■□□□□ 0.22
SMPD4-220ENST00000491319 SLC2A11Q9BYW1 496 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 ABCC13Q9NSE7 274 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 USP36Q9P275 1121 aaKnown RBP16.4■□□□□ 0.22
SMPD4-220ENST00000491319 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.4■□□□□ 0.22
SMPD4-220ENST00000491319 CTNND2Q9UQB3 1225 aa16.4■□□□□ 0.22
SMPD4-220ENST00000491319 KCNJ18B7U540 433 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 PMM2O15305 246 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 TOP3BO95985 862 aaKnown RBP16.39■□□□□ 0.21
SMPD4-220ENST00000491319 MAOBP27338 520 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 HLA-FP30511 346 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 SGSHP51688 502 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 COPAP53621 1224 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 MSANTD2Q6P1R3 559 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 TMPRSS6Q8IU80 811 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 ARHGEF19Q8IW93 802 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 SCML4Q8N228 414 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 MINDY1Q8N5J2 469 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 SLC35F5Q8WV83 523 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 NELFBQ8WX92 580 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 TOE1Q96GM8 510 aaKnown RBP16.39■□□□□ 0.21
SMPD4-220ENST00000491319 WSB2Q9NYS7 404 aaPredicted RBP16.39■□□□□ 0.21
SMPD4-220ENST00000491319 KIAA1257Q9ULG3 409 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 WASF3Q9UPY6 502 aa16.39■□□□□ 0.21
SMPD4-220ENST00000491319 PPP1R3GB7ZBB8 358 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 ARHGAP33O14559 1287 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 SYNCRIPO60506 623 aaKnown RBP16.38■□□□□ 0.21
SMPD4-220ENST00000491319 EPHX1P07099 455 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 NCAM1P13591 858 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 HLA-EP13747 358 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 PPP1R2P41236 205 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 TPMTP51580 245 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 ZNF132P52740 706 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 SEMA3BQ13214 749 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 ADGRF1Q5T601 910 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 SERPINA13PQ6UXR4 307 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 RRAGAQ7L523 313 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 PIP4P1Q86T03 277 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 METTL3Q86U44 580 aaKnown RBP16.38■□□□□ 0.21
SMPD4-220ENST00000491319 ELOA2Q8IYF1 753 aaPredicted RBP16.38■□□□□ 0.21
SMPD4-220ENST00000491319 HDDC3Q8N4P3 179 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 SIPA1Q96FS4 1042 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 GPR174Q9BXC1 333 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 STOML2Q9UJZ1 356 aa16.38■□□□□ 0.21
SMPD4-220ENST00000491319 KNL1Q8NG31 2342 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 PLXNA2O75051 1894 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 IGF2RP11717 2491 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 MEI4A8MW99 385 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 C1QTNF9BB2RNN3 333 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 BIN1O00499 593 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 OPHN1O60890 802 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 LATS1O95835 1130 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 IGLV3-27P01718 113 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 LTFP02788 710 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 C1QTNF9P0C862 333 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 STX17P56962 302 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 ZNF445P59923 1031 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 ARID5AQ03989 594 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 MORC3Q14149 939 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 CNGA2Q16280 664 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 PLEKHG6Q3KR16 790 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 SYCP2LQ5T4T6 812 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 RFWD3Q6PCD5 774 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 CHST9Q7L1S5 443 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 ZNF366Q8N895 744 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 WFDC5Q8TCV5 224 aa16.37■□□□□ 0.21
SMPD4-220ENST00000491319 CYB5D2Q8WUJ1 264 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms