RNA–Protein interactions for RNA: ENST00000491233.1

COL6A3-211, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 3

Gene COL6A3, Length 652 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-211ENST00000491233 KRT37O76014 449 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 CALCAP01258 141 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 SERPINF2P08697 491 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 CEACAM1P13688 526 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 BMP6P22004 513 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 PRKCHP24723 683 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 HOXD9P28356 352 aaPredicted RBP14.24□□□□□ -0.13
COL6A3-211ENST00000491233 ATXN3P54252 364 aaPredicted RBP14.24□□□□□ -0.13
COL6A3-211ENST00000491233 FOXC1Q12948 553 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 ZNF234Q14588 700 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 MPPE1Q53F39 396 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 RABEPKQ7Z6M1 372 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 CACUL1Q86Y37 369 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 SCML4Q8N228 414 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 RBBP8NLQ8NC74 664 aaPredicted RBP14.24□□□□□ -0.13
COL6A3-211ENST00000491233 SORCS1Q8WY21 1168 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 ZSWIM1Q9BR11 485 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 SLC2A11Q9BYW1 496 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 MKRN2Q9H000 416 aaKnown RBP14.24□□□□□ -0.13
COL6A3-211ENST00000491233 CAPN10Q9HC96 672 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 ABCC13Q9NSE7 274 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 ELOVL2Q9NXB9 296 aa14.24□□□□□ -0.13
COL6A3-211ENST00000491233 KMT2BQ9UMN6 2715 aaPredicted RBP14.23□□□□□ -0.13
COL6A3-211ENST00000491233 BICDL2A1A5D9 508 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 PPP1R3GB7ZBB8 358 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 RNF225M0QZC1 329 aaPredicted RBP14.23□□□□□ -0.13
COL6A3-211ENST00000491233 BIN1O00499 593 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 SYNCRIPO60506 623 aaKnown RBP14.23□□□□□ -0.13
COL6A3-211ENST00000491233 GABBR2O75899 941 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 CD6P30203 668 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 ZNF132P52740 706 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 ZNF445P59923 1031 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 GFPT1Q06210 699 aaPredicted RBP14.23□□□□□ -0.13
COL6A3-211ENST00000491233 CETN1Q12798 172 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 TMEM215Q68D42 235 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 PMF1Q6P1K2 205 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 MSANTD2Q6P1R3 559 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 SERPINA13PQ6UXR4 307 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 RRAGAQ7L523 313 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 ARHGEF19Q8IW93 802 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 ELOA2Q8IYF1 753 aaPredicted RBP14.23□□□□□ -0.13
COL6A3-211ENST00000491233 RGL4Q8IZJ4 473 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 LMO3Q8TAP4 145 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 SLC35F5Q8WV83 523 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 USP36Q9P275 1121 aaKnown RBP14.23□□□□□ -0.13
COL6A3-211ENST00000491233 STOML2Q9UJZ1 356 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 EPG5Q9HCE0 2579 aa14.23□□□□□ -0.13
COL6A3-211ENST00000491233 MEI4A8MW99 385 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 P4HA2O15460 535 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 LATS1O95835 1130 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 EPHX1P07099 455 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 NCAM1P13591 858 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 HLA-FP30511 346 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 STX17P56962 302 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 ARID5AQ03989 594 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 MORC3Q14149 939 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 E2F5Q15329 346 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 STILQ15468 1287 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 CNGA2Q16280 664 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 ADGRF1Q5T601 910 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 FOXR2Q6PJQ5 311 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 METTL3Q86U44 580 aaKnown RBP14.22□□□□□ -0.13
COL6A3-211ENST00000491233 TMPRSS6Q8IU80 811 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 TRIM59Q8IWR1 403 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 HDDC3Q8N4P3 179 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 MINDY1Q8N5J2 469 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 OR2I1PQ8NGU4 316 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 WFIKKN2Q8TEU8 576 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 CLEC4CQ8WTT0 213 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 IRGQQ8WZA9 623 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 PRCCQ92733 491 aaPredicted RBP14.22□□□□□ -0.13
COL6A3-211ENST00000491233 TOE1Q96GM8 510 aaKnown RBP14.22□□□□□ -0.13
COL6A3-211ENST00000491233 ZNF419Q96HQ0 510 aaPredicted RBP14.22□□□□□ -0.13
COL6A3-211ENST00000491233 GPR174Q9BXC1 333 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 SLC32A1Q9H598 525 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 SUSD2Q9UGT4 822 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 CHD8Q9HCK8 2581 aa14.22□□□□□ -0.13
COL6A3-211ENST00000491233 KCNJ18B7U540 433 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 ARHGAP33O14559 1287 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 GADD45BO75293 160 aaPredicted RBP14.21□□□□□ -0.13
COL6A3-211ENST00000491233 IGLV3-27P01718 113 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 LTFP02788 710 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 HLA-EP13747 358 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 MAOBP27338 520 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 TPMTP51580 245 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 SGSHP51688 502 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 COPAP53621 1224 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 GCNT1Q02742 428 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 KCNH2Q12809 1159 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 PAK1Q13153 545 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 SEMA3BQ13214 749 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 PLEKHG6Q3KR16 790 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 WDR45BQ5MNZ6 344 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 SYCP2LQ5T4T6 812 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 CHST9Q7L1S5 443 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 CYB5D2Q8WUJ1 264 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 GOLGA1Q92805 767 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 FOXJ1Q92949 421 aa14.21□□□□□ -0.13
COL6A3-211ENST00000491233 TMA16Q96EY4 203 aaKnown RBP14.21□□□□□ -0.13
COL6A3-211ENST00000491233 SIPA1Q96FS4 1042 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms