RNA–Protein interactions for RNA: ENST00000491028.1

MCF2L-230, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-230ENST00000491028 IL1R2P27930 398 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 ADRA1BP35368 520 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 PUS10Q3MIT2 529 aaKnown RBP19.33■□□□□ 0.68
MCF2L-230ENST00000491028 EFHC2Q5JST6 749 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 ERMARDQ5T6L9 678 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 POTEHQ6S545 545 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 CYP4V2Q6ZWL3 525 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-230ENST00000491028 OTOP3Q7RTS5 596 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 ARID3BQ8IVW6 561 aaPredicted RBP19.33■□□□□ 0.68
MCF2L-230ENST00000491028 CCDC185Q8N715 623 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 UBL4BQ8N7F7 174 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 KIAA1958Q8N8K9 716 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 ADAMTS19Q8TE59 1207 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 SH3RF2Q8TEC5 729 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 SMARCD2Q92925 531 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 AZIN2Q96A70 460 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 HES6Q96HZ4 224 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 HAPLN3Q96S86 360 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 SNRNP25Q9BV90 132 aaKnown RBP19.33■□□□□ 0.68
MCF2L-230ENST00000491028 OBP2AQ9NY56 170 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 DDX56Q9NY93 547 aaKnown RBP19.33■□□□□ 0.68
MCF2L-230ENST00000491028 FZD10Q9ULW2 581 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 AP4E1Q9UPM8 1137 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 PCDHA3Q9Y5H8 950 aa19.33■□□□□ 0.68
MCF2L-230ENST00000491028 ESPNB1AK53 854 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 LEFTY2O00292 366 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 IRF1P10914 325 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 CORO1AP31146 461 aaKnown RBP19.32■□□□□ 0.68
MCF2L-230ENST00000491028 GBP2P32456 591 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-230ENST00000491028 KCNQ1P51787 676 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 ETF1P62495 437 aaKnown RBP19.32■□□□□ 0.68
MCF2L-230ENST00000491028 ZXDBP98169 803 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 ZNF77Q15935 545 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 CELF5Q8N6W0 485 aaKnown RBP19.32■□□□□ 0.68
MCF2L-230ENST00000491028 E2F7Q96AV8 911 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 C16orf45Q96MC5 204 aaPredicted RBP19.32■□□□□ 0.68
MCF2L-230ENST00000491028 MYADMQ96S97 322 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 ZWILCHQ9H900 591 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 CFAP97Q9P2B7 532 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 ZNF510Q9Y2H8 683 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 SH3BP1Q9Y3L3 701 aa19.32■□□□□ 0.68
MCF2L-230ENST00000491028 BRWD1Q9NSI6 2320 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 E2F8A0AVK6 867 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 MOCS2O96007 188 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-230ENST00000491028 RARAP10276 462 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 LAMP2P13473 410 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 GJC1P36383 396 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 SLC11A2P49281 568 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 RPS6KA1Q15418 735 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 FAM78AQ5JUQ0 283 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 Q6ZNB5 142 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 HTR3DQ70Z44 454 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 ACSF2Q96CM8 615 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-230ENST00000491028 SMG9Q9H0W8 520 aaKnown RBP19.31■□□□□ 0.68
MCF2L-230ENST00000491028 EPS15L1Q9UBC2 864 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 PACSIN2Q9UNF0 486 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-230ENST00000491028 FAM50BQ9Y247 325 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
MCF2L-230ENST00000491028 KIF26AQ9ULI4 1882 aaPredicted RBP19.31■□□□□ 0.68
MCF2L-230ENST00000491028 DDX3YO15523 660 aaKnown RBP19.3■□□□□ 0.68
MCF2L-230ENST00000491028 ACSL4O60488 711 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 GREM1O60565 184 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 PAGE1O75459 146 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 ZNF135P52742 658 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-230ENST00000491028 RWDD2BP57060 319 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 NRG1Q02297 640 aaPredicted RBP19.3■□□□□ 0.68
MCF2L-230ENST00000491028 DPYSL2Q16555 572 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 SMTNL2Q2TAL5 461 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 TXNRD3NBQ6F5E7 133 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 KATNAL2Q8IYT4 538 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 HSPH1Q92598 858 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 KRT35Q92764 455 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 C1orf74Q96LT6 269 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 WDR24Q96S15 920 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 DDX50Q9BQ39 737 aaKnown RBP19.3■□□□□ 0.68
MCF2L-230ENST00000491028 TLR10Q9BXR5 811 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 OSBPL2Q9H1P3 480 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 ANLNQ9NQW6 1124 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 STAU2Q9NUL3 570 aaKnown RBP eCLIP19.3■□□□□ 0.68
MCF2L-230ENST00000491028 STOML2Q9UJZ1 356 aa19.3■□□□□ 0.68
MCF2L-230ENST00000491028 I6L893 689 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-230ENST00000491028 ZNF500O60304 480 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-230ENST00000491028 KLKB1P03952 638 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 TNNT1P13805 278 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 FCARP24071 287 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 MARCKSL1P49006 195 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 PEX5P50542 639 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 PDK2Q15119 407 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 SMAD2Q15796 467 aaKnown RBP19.29■□□□□ 0.68
MCF2L-230ENST00000491028 ODF2Q5BJF6 829 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 KCNT1Q5JUK3 1230 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 MTSS1LQ765P7 747 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 VSIG1Q86XK7 387 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 DENND1CQ8IV53 801 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 TDRD5Q8NAT2 981 aaKnown RBP19.29■□□□□ 0.68
MCF2L-230ENST00000491028 FAM71BQ8TC56 605 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 WBP2Q969T9 261 aa19.29■□□□□ 0.68
MCF2L-230ENST00000491028 RBM41Q96IZ5 413 aaKnown RBP19.29■□□□□ 0.68
MCF2L-230ENST00000491028 NAPGQ99747 312 aaPredicted RBP19.29■□□□□ 0.68
MCF2L-230ENST00000491028 PHF7Q9BWX1 381 aaPredicted RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms