RNA–Protein interactions for RNA: ENST00000490391.1

PDLIM1-203, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 458 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-203ENST00000490391 MAPTP10636 758 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 ACAT1P24752 427 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 CD27P26842 260 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 EPHA8P29322 1005 aaPredicted RBP7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 ACSL1P33121 698 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 MAGEA11P43364 429 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 LSSP48449 732 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 STARD3Q14849 445 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 ANO4Q32M45 955 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 SFMBT2Q5VUG0 894 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 CDCP2Q5VXM1 449 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 BTBD8Q5XKL5 378 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 IGF2-ASQ6U949 168 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 XKR5Q6UX68 686 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 KDM7AQ6ZMT4 941 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 KANSL1Q7Z3B3 1105 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 DDX42Q86XP3 938 aaKnown RBP eCLIP7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 SCN4BQ8IWT1 228 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 BBS7Q8IWZ6 715 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 ADGRF2Q8IZF7 708 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 LSMEM2Q8N112 164 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 PDCL2Q8N4E4 241 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 KCNB2Q92953 911 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 BIRC7Q96CA5 298 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 TRIM11Q96F44 468 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 SIPA1Q96FS4 1042 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 P2RY11Q96G91 374 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 SPATA17Q96L03 361 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 SEMA3CQ99985 751 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 NTPCRQ9BSD7 190 aaKnown RBP7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 SEPT3Q9UH03 358 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 ADAMTS1Q9UHI8 967 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 L1RE1Q9UN81 338 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 CSMD2Q7Z408 3487 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 MYH11P35749 1972 aa7.57□□□□□ -1.2
PDLIM1-203ENST00000490391 A0A1W2PNU3 283 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 KPNA7A9QM74 516 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 VILLO15195 856 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 GREM1O60565 184 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 HIP1RO75146 1068 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 ITGAVP06756 1048 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 CKMT2P17540 419 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 ACO1P21399 889 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 MUTP22033 750 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 ACP1P24666 158 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 CDC25AP30304 524 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 ZNF132P52740 706 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 TMEM132DQ14C87 1099 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 DENND5BQ6ZUT9 1274 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 FAM124AQ86V42 546 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 OSTM1Q86WC4 334 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 CACUL1Q86Y37 369 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 FAM26EQ8N5C1 309 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 SCFD1Q8WVM8 642 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 ABHD17AQ96GS6 310 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 LIN37Q96GY3 246 aaPredicted RBP7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 CEP295NLQ96MC4 621 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 RUSC1Q9BVN2 902 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 POLR1BQ9H9Y6 1135 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 THSD1Q9NS62 852 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 NDFIP2Q9NV92 336 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 MARK1Q9P0L2 795 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 CPSF3Q9UKF6 684 aaKnown RBP7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 DERAQ9Y315 318 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 CCDC168Q8NDH2 2452 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 HIVEP3Q5T1R4 2406 aa7.56□□□□□ -1.2
PDLIM1-203ENST00000490391 A0A1B0GTH6 734 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 SFI1A8K8P3 1242 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 OGTO15294 1046 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 USP12O75317 370 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 WNT1P04628 370 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 IGHV4-34P06331 123 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 FAM87AP0C7U9 286 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 MBL2P11226 248 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 PRKCSHP14314 528 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 TYRP14679 529 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 ABCB4P21439 1286 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 RPS6KB1P23443 525 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 PPP3CCP48454 512 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 RACK1P63244 317 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 NOP14P78316 857 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 GRIN1Q05586 938 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 ST3GAL1Q11201 340 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 TAF10Q12962 218 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 STRN3Q13033 797 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 TOB2Q14106 344 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 KYAT1Q16773 422 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 FAM171BQ6P995 826 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 CCDC81Q6ZN84 652 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 SPATA2LQ8IUW3 424 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 CD302Q8IX05 232 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 PRCCQ92733 491 aaPredicted RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 EXTL1Q92935 676 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 KCNN1Q92952 543 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 JAKMIP1Q96N16 626 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 MMS19Q96T76 1030 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 EPN3Q9H201 632 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 C17orf75Q9HAS0 396 aa7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 DDX43Q9NXZ2 648 aaKnown RBP7.55□□□□□ -1.2
PDLIM1-203ENST00000490391 THAP10Q9P2Z0 257 aaPredicted RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms