RNA–Protein interactions for RNA: ENST00000490101.1

SRM-206, Transcript of spermidine synthase, human

TSL 2

Gene SRM, Length 461 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRM-206	ENST00000490101	POPDC2	Q9HBU9	364 aa		18.92	■□□□□ 0.62
SRM-206	ENST00000490101	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
SRM-206	ENST00000490101	FBXO4	Q9UKT5	387 aa		18.92	■□□□□ 0.62
SRM-206	ENST00000490101	SNX12	Q9UMY4	172 aa		18.92	■□□□□ 0.62
SRM-206	ENST00000490101	TICRR	Q7Z2Z1	1910 aa		18.92	■□□□□ 0.62
SRM-206	ENST00000490101	F5	P12259	2224 aa		18.92	■□□□□ 0.62
SRM-206	ENST00000490101	CACNA1A	O00555	2505 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	SHISA7	A6NL88	538 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	SLC38A8	A6NNN8	435 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	FYN	P06241	537 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	YWHAQ	P27348	245 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	SDC4	P31431	198 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	NOS2	P35228	1153 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	CCDC14	Q49A88	953 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	STXBP5	Q5T5C0	1151 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	CC2D1A	Q6P1N0	951 aa	Predicted RBP	18.91	■□□□□ 0.62
SRM-206	ENST00000490101	TSSK4	Q6SA08	328 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	MON1A	Q86VX9	555 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	TMC8	Q8IU68	726 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	DEFB106A	Q8N104	65 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	DCLK2	Q8N568	766 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	DEPDC1B	Q8WUY9	529 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	CENPI	Q92674	756 aa	Predicted RBP	18.91	■□□□□ 0.62
SRM-206	ENST00000490101	NT5C3B	Q969T7	300 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	CLDN23	Q96B33	292 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	ZNF334	Q9HCZ1	680 aa	Predicted RBP	18.91	■□□□□ 0.62
SRM-206	ENST00000490101	RRN3	Q9NYV6	651 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	EHD2	Q9NZN4	543 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	PCDHA3	Q9Y5H8	950 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	PIAS3	Q9Y6X2	628 aa		18.91	■□□□□ 0.62
SRM-206	ENST00000490101	CEP250	Q9BV73	2442 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	CCDC66	A2RUB6	948 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	HEPACAM2	A8MVW5	462 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	MAN2B1	O00754	1011 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	DDX3Y	O15523	660 aa	Known RBP	18.9	■□□□□ 0.62
SRM-206	ENST00000490101	URI1	O94763	535 aa	Predicted RBP	18.9	■□□□□ 0.62
SRM-206	ENST00000490101	DES	P17661	470 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	TCP1	P17987	556 aa	Known RBP	18.9	■□□□□ 0.62
SRM-206	ENST00000490101	CTNNA1	P35221	906 aa	Known RBP	18.9	■□□□□ 0.62
SRM-206	ENST00000490101	PCK1	P35558	622 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	RPS9	P46781	194 aa	Known RBP	18.9	■□□□□ 0.62
SRM-206	ENST00000490101	PEX5	P50542	639 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	USP46	P62068	366 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	ZNF528	Q3MIS6	628 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	LRRC38	Q5VT99	294 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	BSPRY	Q5W0U4	402 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	SCD5	Q86SK9	330 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	YAF2	Q8IY57	180 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	ARHGAP18	Q8N392	663 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	ARFGAP1	Q8N6T3	406 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	GIPC2	Q8TF65	315 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	RUBCN	Q92622	972 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	GOLGA1	Q92805	767 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	LRRC3	Q9BY71	257 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	PACSIN2	Q9UNF0	486 aa	Predicted RBP	18.9	■□□□□ 0.62
SRM-206	ENST00000490101	SAR1B	Q9Y6B6	198 aa		18.9	■□□□□ 0.62
SRM-206	ENST00000490101	COL4A2	P08572	1712 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	LRCH4	O75427	683 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	RNF8	O76064	485 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	ENDOD1	O94919	500 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	CSH1	P0DML2	217 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	CSH2	P0DML3	217 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	YWHAG	P61981	247 aa	Known RBP eCLIP	18.89	■□□□□ 0.61
SRM-206	ENST00000490101	MTAP	Q13126	283 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	FZD5	Q13467	585 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	SLC25A52	Q3SY17	297 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	MFSD6L	Q8IWD5	586 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	RHOT1	Q8IXI2	618 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	UBL4B	Q8N7F7	174 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	FAM3C	Q92520	227 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	RSPRY1	Q96DX4	576 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	CFAP57	Q96MR6	1250 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	NPY6R	Q99463	290 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	ATXN3L	Q9H3M9	355 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	TRPV4	Q9HBA0	871 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	ABCC13	Q9NSE7	274 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	GREB1	Q4ZG55	1949 aa		18.89	■□□□□ 0.61
SRM-206	ENST00000490101	CES2	O00748	559 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	PSTPIP1	O43586	416 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	HMGA1	P17096	107 aa	Known RBP	18.88	■□□□□ 0.61
SRM-206	ENST00000490101	PSEN1	P49768	467 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	TAS2R40	P59535	323 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	IFRD2	Q12894	506 aa	Predicted RBP	18.88	■□□□□ 0.61
SRM-206	ENST00000490101	VEPH1	Q14D04	833 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	C15orf59	Q2T9L4	293 aa	Predicted RBP	18.88	■□□□□ 0.61
SRM-206	ENST00000490101	DCAF6	Q58WW2	860 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	SYPL2	Q5VXT5	272 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	STRADA	Q7RTN6	431 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	BNIPL	Q7Z465	357 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	DNAJB7	Q7Z6W7	309 aa	Predicted RBP	18.88	■□□□□ 0.61
SRM-206	ENST00000490101	SUMF1	Q8NBK3	374 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	STKLD1	Q8NE28	680 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	CSGALNACT1	Q8TDX6	532 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	KRT35	Q92764	455 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	FBXO32	Q969P5	355 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	PBK	Q96KB5	322 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	MYRFL	Q96LU7	910 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	OSBPL9	Q96SU4	736 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	CDC23	Q9UJX2	597 aa		18.88	■□□□□ 0.61
SRM-206	ENST00000490101	STAP1	Q9ULZ2	295 aa		18.88	■□□□□ 0.61

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