RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 RRAGAQ7L523 313 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 PPM1KQ8N3J5 372 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 EHBP1Q8NDI1 1231 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CLEC4CQ8WTT0 213 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 DDI1Q8WTU0 396 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 SORCS1Q8WY21 1168 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 ZNF419Q96HQ0 510 aaPredicted RBP20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 KREMEN1Q96MU8 473 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 NUSAP1Q9BXS6 441 aaKnown RBP20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CAPN10Q9HC96 672 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 CFAP47Q6ZTR5 3102 aa20.27■□□□□ 0.84
TNFRSF1B-202ENST00000489921 BIN1O00499 593 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TSPAN3O60637 253 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 IGLV3-27P01718 113 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CYBBP04839 570 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SGSHP51688 502 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MARSP56192 900 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 GCNT1Q02742 428 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 KCNH2Q12809 1159 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 LMAN2Q12907 356 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MSANTD2Q6P1R3 559 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ANKS1BQ7Z6G8 1248 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 METTL3Q86U44 580 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SIX6OS1Q8N1H7 587 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 USP36Q9P275 1121 aaKnown RBP20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ANGPTL2Q9UKU9 493 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 WASF3Q9UPY6 502 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CNTN6Q9UQ52 1028 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CTNND2Q9UQB3 1225 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 PCNX2A6NKB5 2137 aa20.26■□□□□ 0.83
TNFRSF1B-202ENST00000489921 KCNJ18B7U540 433 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 NPC1O15118 1278 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 FYNP06241 537 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CSRP1P21291 193 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 PRKCHP24723 683 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 HLA-FP30511 346 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 DPP6P42658 865 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 RPL34P49207 117 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 HARS2P49590 506 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 NOVA1P51513 510 aaKnown RBP20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 COPAP53621 1224 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 STX17P56962 302 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 DUOXA1Q1HG43 343 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MPPE1Q53F39 396 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ADGRF1Q5T601 910 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 KIAA0907Q7Z7F0 614 aaPredicted RBP20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TRIML1Q8N9V2 468 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 RNF139Q8WU17 664 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 IRGQQ8WZA9 623 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ITM2CQ9NQX7 267 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SLC6A14Q9UN76 642 aa20.25■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CACNA1EQ15878 2313 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 M0QYV0 167 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 LATS1O95835 1130 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SERPINF2P08697 491 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 NCAM1P13591 858 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CEACAM1P13688 526 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 EIF4HQ15056 248 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 UAP1L1Q3KQV9 507 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 KIAA1324Q6UXG2 1013 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CEP76Q8TAP6 659 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 HSFY1Q96LI6 401 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 HSPA12BQ96MM6 686 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MED15Q96RN5 788 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SRRTQ9BXP5 876 aaKnown RBP20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 PRDM16Q9HAZ2 1276 aa20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 WSB2Q9NYS7 404 aaPredicted RBP20.24■□□□□ 0.83
TNFRSF1B-202ENST00000489921 GOLGA6L7A0A1B0GV03 622 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 BICDL2A1A5D9 508 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ZBTB24O43167 697 aaPredicted RBP20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 C7P10643 843 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 GPD2P43304 727 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MAPK8P45983 427 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 STILQ15468 1287 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 FAM133BQ5BKY9 247 aaKnown RBP20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 PIP4P1Q86T03 277 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 ADIPOR2Q86V24 386 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 WFDC5Q8TCV5 224 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 UCMAQ8WVF2 138 aa20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TMA16Q96EY4 203 aaKnown RBP20.23■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TIMM44O43615 452 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 KRT37O76014 449 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 LTFP02788 710 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CFIP05156 583 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CD6P30203 668 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SLC6A4P31645 630 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TPMTP51580 245 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 CETN1Q12798 172 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 PAK1Q13153 545 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 SEMA3BQ13214 749 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 STARD3Q14849 445 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 PIK3R6Q5UE93 754 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 NADSYN1Q6IA69 706 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 RFWD3Q6PCD5 774 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TMPRSS6Q8IU80 811 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 DEFB124Q8NES8 71 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 MYEOVQ96EZ4 313 aa20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 TOE1Q96GM8 510 aaKnown RBP20.22■□□□□ 0.83
TNFRSF1B-202ENST00000489921 LMLNQ96KR4 655 aa20.22■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms