RNA–Protein interactions for RNA: ENST00000489907.2

SMG5-205, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG5, Length 535 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-205ENST00000489907 AGO1Q9UL18 857 aaKnown RBP8.55□□□□□ -1.04
SMG5-205ENST00000489907 GOLGA6L4A6NEF3 574 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 NPC1O15118 1278 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 GABBR2O75899 941 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 ATXN1LP0C7T5 689 aaKnown RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 P4HA1P13674 534 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 CHKAP35790 457 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 COG7P83436 770 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 DPYDQ12882 1025 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 CAMK2GQ13555 558 aaPredicted RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 TRIP4Q15650 581 aaPredicted RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 COL28A1Q2UY09 1125 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 HLA-BQ31612 363 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 WDR45BQ5MNZ6 344 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 C10orf120Q5SQS8 335 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 C19orf48Q6RUI8 117 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 KIAA1324Q6UXG2 1013 aaKnown RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 MARCH9Q86YJ5 346 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 ZC3H3Q8IXZ2 948 aaKnown RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 ZCCHC9Q8N567 271 aaKnown RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 SLC4A11Q8NBS3 891 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 MDM1Q8TC05 714 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 SORCS1Q8WY21 1168 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 SEMA4DQ92854 862 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 JAKMIP2Q96AA8 810 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 TMEM245Q9H330 911 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 GAREM1Q9H706 876 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 CYP3A43Q9HB55 503 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 TM7SF3Q9NS93 570 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 DKK4Q9UBT3 224 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 EIF2B4Q9UI10 523 aaKnown RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 STOML2Q9UJZ1 356 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 NAGPAQ9UK23 515 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 BTBD3Q9Y2F9 522 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 FNDC3AQ9Y2H6 1198 aaKnown RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 ZNF510Q9Y2H8 683 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 IGSF10Q6WRI0 2623 aa8.54□□□□□ -1.04
SMG5-205ENST00000489907 COL5A1P20908 1838 aaPredicted RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 ANKRD11Q6UB99 2663 aaPredicted RBP8.54□□□□□ -1.04
SMG5-205ENST00000489907 MYLKQ15746 1914 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 TULP2O00295 520 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 BCAT2O15382 392 aaPredicted RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 PRR29P0C7W0 189 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 TRIM49P0CI25 452 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 TRIM49CP0CI26 452 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 GNSP15586 552 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 BMP6P22004 513 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 HOXD9P28356 352 aaPredicted RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 HLA-FP30511 346 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 OXTRP30559 389 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 CORO1AP31146 461 aaKnown RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 ACSL1P33121 698 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 RDXP35241 583 aaKnown RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 GCLMP48507 274 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 VAMP7P51809 220 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 RAD23BP54727 409 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 ENPEPQ07075 957 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 GOLGA8FQ08AF8 430 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 GOLGA8DPQ0D2H9 430 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 EIF4HQ15056 248 aaKnown RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 PTPRNQ16849 979 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 ZCWPW2Q504Y3 356 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 KCNT1Q5JUK3 1230 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 PDZD3Q86UT5 571 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 ADIPOR2Q86V24 386 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 PIGZQ86VD9 579 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 DENND1CQ8IV53 801 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 NDRG1Q92597 394 aaKnown RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 SIPA1Q96FS4 1042 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 MYO19Q96H55 970 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 LMLNQ96KR4 655 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 FUCA2Q9BTY2 467 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 NUP58Q9BVL2 599 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 SLC2A11Q9BYW1 496 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 C6orf106Q9H6K1 298 aaPredicted RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 OSGEPQ9NPF4 335 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 PCDHB9Q9Y5E1 797 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 PCDHGB2Q9Y5G2 931 aa8.53□□□□□ -1.04
SMG5-205ENST00000489907 NYNRINQ9P2P1 1898 aaKnown RBP8.53□□□□□ -1.04
SMG5-205ENST00000489907 A0A1B0GVT2 93 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 KCNK3O14649 394 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 ZBTB24O43167 697 aaPredicted RBP8.52□□□□□ -1.05
SMG5-205ENST00000489907 PAPSS1O43252 624 aaPredicted RBP8.52□□□□□ -1.05
SMG5-205ENST00000489907 TIMM44O43615 452 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 TSPAN3O60637 253 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 RHOBTB3O94955 611 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 HMBSP08397 361 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 HLA-EP13747 358 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 CD58P19256 250 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 PIK3CAP42336 1068 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 MATKP42679 507 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 CSNK1EP49674 416 aaKnown RBP8.52□□□□□ -1.05
SMG5-205ENST00000489907 EFEMP1Q12805 493 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 KIF19Q2TAC6 998 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 ZNF394Q53GI3 561 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 CEP135Q66GS9 1140 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 ARHGAP17Q68EM7 881 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 ANKS1BQ7Z6G8 1248 aa8.52□□□□□ -1.05
SMG5-205ENST00000489907 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.52□□□□□ -1.05
SMG5-205ENST00000489907 ANKRD52Q8NB46 1076 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms