RNA–Protein interactions for RNA: ENST00000489898.1

SRSF4-204, Transcript of serine and arginine rich splicing factor 4, humanhuman

TSL 3

Gene SRSF4, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF4-204ENST00000489898 TBC1D3BA6NDS4 549 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 KCNJ18B7U540 433 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 I6L893 689 aaPredicted RBP12.34□□□□□ -0.43
SRSF4-204ENST00000489898 RALAP11233 206 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 COG7P83436 770 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 STIM1Q13586 685 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 FUT11Q495W5 492 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 STPG1Q5TH74 334 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 TAC4Q86UU9 113 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 ADIPOR2Q86V24 386 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 CCDC26Q8TAB7 109 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 SORCS1Q8WY21 1168 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 IRGQQ8WZA9 623 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 ERLEC1Q96DZ1 483 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 CDK5RAP1Q96SZ6 601 aaKnown RBP12.34□□□□□ -0.43
SRSF4-204ENST00000489898 TMEM245Q9H330 911 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 VPS45Q9NRW7 570 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 WDR35Q9P2L0 1181 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 XPO7Q9UIA9 1087 aaKnown RBP12.34□□□□□ -0.43
SRSF4-204ENST00000489898 INTS6Q9UL03 887 aaKnown RBP12.34□□□□□ -0.43
SRSF4-204ENST00000489898 KIAA1257Q9ULG3 409 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 HBS1LQ9Y450 684 aaKnown RBP12.34□□□□□ -0.43
SRSF4-204ENST00000489898 SLCO1B1Q9Y6L6 691 aa12.34□□□□□ -0.43
SRSF4-204ENST00000489898 GTPBP10A4D1E9 387 aaKnown RBP12.33□□□□□ -0.44
SRSF4-204ENST00000489898 E5RJQ4 531 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 LATS1O95835 1130 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 IGLV3-19P01714 112 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 LTFP02788 710 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 LCP1P13796 627 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 PON1P27169 355 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 YWHAEP62258 255 aaKnown RBP12.33□□□□□ -0.44
SRSF4-204ENST00000489898 CREB5Q02930 508 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 SYPL2Q5VXT5 272 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 RBM43Q6ZSC3 357 aaKnown RBP12.33□□□□□ -0.44
SRSF4-204ENST00000489898 ARHGAP18Q8N392 663 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 HSFY1Q96LI6 401 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 CRACR2AQ9BSW2 395 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 EDEM2Q9BV94 578 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 CAPN10Q9HC96 672 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 FSCN3Q9NQT6 498 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 CHMP5Q9NZZ3 219 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 EVLQ9UI08 416 aaPredicted RBP12.33□□□□□ -0.44
SRSF4-204ENST00000489898 HOOK1Q9UJC3 728 aaKnown RBP12.33□□□□□ -0.44
SRSF4-204ENST00000489898 PILRBQ9UKJ0 227 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.33□□□□□ -0.44
SRSF4-204ENST00000489898 STON1Q9Y6Q2 735 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 LRRK1Q38SD2 2015 aa12.33□□□□□ -0.44
SRSF4-204ENST00000489898 COL5A1P20908 1838 aaPredicted RBP12.32□□□□□ -0.44
SRSF4-204ENST00000489898 PKD1L2Q7Z442 2459 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 GOLGA6L7A0A1B0GV03 622 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 GNA14O95837 355 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 NCAM1P13591 858 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ITPKAP23677 461 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 PMLP29590 882 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 RING1Q06587 406 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 KCNMA1Q12791 1236 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 PDCLQ13371 301 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 NNTQ13423 1086 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ZNF234Q14588 700 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 TAF5Q15542 800 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ELF2Q15723 593 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 PPM1JQ5JR12 505 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 PIK3R6Q5UE93 754 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 BTBD8Q5XKL5 378 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 RFWD3Q6PCD5 774 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 BEND5Q7L4P6 421 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ARMCX6Q7L4S7 300 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ANKS1BQ7Z6G8 1248 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 TADA2BQ86TJ2 420 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 TMEM110Q86TL2 294 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 TMEFF1Q8IYR6 380 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ZNF606Q8WXB4 792 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 XPO6Q96QU8 1125 aaKnown RBP12.32□□□□□ -0.44
SRSF4-204ENST00000489898 CPXM1Q96SM3 734 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 NAA15Q9BXJ9 866 aaKnown RBP12.32□□□□□ -0.44
SRSF4-204ENST00000489898 DCLK3Q9C098 648 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 LRRC4Q9HBW1 653 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ABCC13Q9NSE7 274 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 OLA1Q9NTK5 396 aaKnown RBP12.32□□□□□ -0.44
SRSF4-204ENST00000489898 LMBRD1Q9NUN5 540 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 HESX1Q9UBX0 185 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 APEX2Q9UBZ4 518 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 NAALADL1Q9UQQ1 740 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 ZNF510Q9Y2H8 683 aa12.32□□□□□ -0.44
SRSF4-204ENST00000489898 KNL1Q8NG31 2342 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 GIPC1O14908 333 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 IRAK2O43187 625 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 GJB3O75712 270 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 CAVIN2O95810 425 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 CD70P32970 193 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 CHKAP35790 457 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 IRAK1P51617 712 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 BNC1Q01954 994 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 EIF4HQ15056 248 aaKnown RBP12.31□□□□□ -0.44
SRSF4-204ENST00000489898 STILQ15468 1287 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 PTPN20Q4JDL3 420 aa12.31□□□□□ -0.44
SRSF4-204ENST00000489898 AASDHQ4L235 1098 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms