RNA–Protein interactions for RNA: ENST00000489554.1

SCAMP4-208, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 3

Gene SCAMP4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-208ENST00000489554 CCDC42Q96M95 316 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 DESI2Q9BSY9 194 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 PACSIN1Q9BY11 444 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 ISCUQ9H1K1 167 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 LRRC4Q9HBW1 653 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 KCND1Q9NSA2 647 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 TJP2Q9UDY2 1190 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 ZNF510Q9Y2H8 683 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 ADGRG1Q9Y653 693 aa11.03□□□□□ -0.64
SCAMP4-208ENST00000489554 OTOGLQ3ZCN5 2332 aa11.02□□□□□ -0.64
SCAMP4-208ENST00000489554 EP300Q09472 2414 aaPredicted RBP11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 A0A0A0MRY4 1105 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 M0QYV0 167 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 HRO43593 1189 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 GREM1O60565 184 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 KAT7O95251 611 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 APBB3O95704 486 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 LSM8O95777 96 aaKnown RBP11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 ZBED1O96006 694 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 GZMAP12544 262 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 TNFAIP3P21580 790 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 TNFRSF4P43489 277 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 SLC6A11P48066 632 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 YWHAGP61981 247 aaKnown RBP eCLIP11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 ANO4Q32M45 955 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 PTPN20Q4JDL3 420 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 NAA35Q5VZE5 725 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 PMF1Q6P1K2 205 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 ALKBH5Q6P6C2 394 aaKnown RBP11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 TRIM72Q6ZMU5 477 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 NUDT18Q6ZVK8 323 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 CEP68Q76N32 757 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 MON1BQ7L1V2 547 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 RSRC2Q7L4I2 434 aaKnown RBP11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 C12orf40Q86WS4 652 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 ETFBKMTQ8IXQ9 262 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 DCLK2Q8N568 766 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 UBA3Q8TBC4 463 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 KCTD13Q8WZ19 329 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 WBP2Q969T9 261 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 ULBP1Q9BZM6 244 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 DCLK3Q9C098 648 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 ARHGEF4Q9NR80 690 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 OLA1Q9NTK5 396 aaKnown RBP11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 MARK1Q9P0L2 795 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 WDR35Q9P2L0 1181 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 DEC1Q9P2X7 70 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 NUDT5Q9UKK9 219 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 STRIP2Q9ULQ0 834 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 TFR2Q9UP52 801 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 VPS13AQ96RL7 3174 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 GPR179Q6PRD1 2367 aa11.02□□□□□ -0.65
SCAMP4-208ENST00000489554 TCRBV5S1A1TA0A578 114 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 GOLGA6L9A6NEM1 432 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 MDM4O15151 490 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 AXIN1O15169 862 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 MED7O43513 233 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 AKR1B10O60218 316 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 TULP3O75386 442 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 RPP40O75818 363 aaKnown RBP11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 STC2O76061 302 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 RETP07949 1114 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 MMP8P22894 467 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 CYLC1P35663 651 aaPredicted RBP11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 SEC13P55735 322 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 KDSRQ06136 332 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 ADIGQ0VDE8 80 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 EFEMP1Q12805 493 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 PDCLQ13371 301 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 C2orf27AQ580R0 203 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 ACAD10Q6JQN1 1059 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 Q6ZNB5 142 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 TMEM25Q86YD3 366 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 PHF13Q86YI8 300 aaPredicted RBP11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 MIB1Q86YT6 1006 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 KIAA2013Q8IYS2 634 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 SIX6OS1Q8N1H7 587 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 SCML4Q8N228 414 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 PHTF2Q8N3S3 785 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 TSTD1Q8NFU3 115 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 KCNV2Q8TDN2 545 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 GAB3Q8WWW8 586 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 CPA5Q8WXQ8 436 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 XPO6Q96QU8 1125 aaKnown RBP11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 HHIPQ96QV1 700 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 CPXM1Q96SM3 734 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 SLC4A5Q9BY07 1137 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 CNGB3Q9NQW8 809 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 EBF1Q9UH73 591 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 RASAL2Q9UJF2 1139 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 MMP17Q9ULZ9 603 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 MYH10P35580 1976 aa11.01□□□□□ -0.65
SCAMP4-208ENST00000489554 MYO16Q9Y6X6 1858 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 TBC1D3BA6NDS4 549 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 USP27XA6NNY8 438 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 TMCO5BA8MYB1 307 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 NEDD8-MDP1E9PL57 170 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 PJA2O43164 708 aa11□□□□□ -0.65
SCAMP4-208ENST00000489554 ZSCAN12O43309 604 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms