RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 UNGP13051 313 aaPredicted RBP18.03■□□□□ 0.48
MDC1-206ENST00000489540 NSFP46459 744 aaKnown RBP18.03■□□□□ 0.48
MDC1-206ENST00000489540 DGKGP49619 791 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 SEC13P55735 322 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 RNASE9P60153 205 aaKnown RBP18.03■□□□□ 0.48
MDC1-206ENST00000489540 MESP2Q0VG99 397 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 MTA1Q13330 715 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 MPP7Q5T2T1 576 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 FAM102AQ5T9C2 384 aaPredicted RBP18.03■□□□□ 0.48
MDC1-206ENST00000489540 PKN3Q6P5Z2 889 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 TSSK4Q6SA08 328 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 SYT13Q7L8C5 426 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 ARCQ7LC44 396 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 ATRIPQ8WXE1 791 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 PCDHB18PQ96TA0 734 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 FAM204AQ9H8W3 233 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 DDIT4Q9NX09 232 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.03■□□□□ 0.48
MDC1-206ENST00000489540 SLC27A6Q9Y2P4 619 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 STARD13Q9Y3M8 1113 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 PCDHGA2Q9Y5H1 932 aa18.03■□□□□ 0.48
MDC1-206ENST00000489540 MIA3Q5JRA6 1907 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 LRRC53A6NM62 1247 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 PROB1E7EW31 1015 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 K7ESF4 209 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 TDGF1P13385 188 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 CCR1P32246 355 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 PBX1P40424 430 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 CLEC16AQ2KHT3 1053 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 C2orf27AQ580R0 203 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 ZC3H12AQ5D1E8 599 aaKnown RBP18.02■□□□□ 0.48
MDC1-206ENST00000489540 C10orf76Q5T2E6 689 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 SFMBT2Q5VUG0 894 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 MMS22LQ6ZRQ5 1243 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 ATP6V0D2Q8N8Y2 350 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 SLC30A5Q8TAD4 765 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 RNF34Q969K3 372 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 BTN2A3PQ96KV6 586 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 TTYH3Q9C0H2 523 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 NUCKS1Q9H1E3 243 aaKnown RBP18.02■□□□□ 0.48
MDC1-206ENST00000489540 SEMA4AQ9H3S1 761 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 SEPT11Q9NVA2 429 aaKnown RBP18.02■□□□□ 0.48
MDC1-206ENST00000489540 C2orf42Q9NWW7 574 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 IFNKQ9P0W0 207 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 STAP1Q9ULZ2 295 aa18.02■□□□□ 0.48
MDC1-206ENST00000489540 CACNA1IQ9P0X4 2223 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 TRIM24O15164 1050 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 TSPAN3O60637 253 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 F9P00740 461 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 ABCB4P21439 1286 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 TNFAIP3P21580 790 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 KIR2DL1P43626 348 aaPredicted RBP18.01■□□□□ 0.47
MDC1-206ENST00000489540 PITX1P78337 314 aaPredicted RBP18.01■□□□□ 0.47
MDC1-206ENST00000489540 CENPCQ03188 943 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 ASIC2Q16515 512 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 C2CD6Q53TS8 623 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 FAM133BQ5BKY9 247 aaKnown RBP18.01■□□□□ 0.47
MDC1-206ENST00000489540 PIK3R6Q5UE93 754 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 TRMT11Q7Z4G4 463 aaKnown RBP18.01■□□□□ 0.47
MDC1-206ENST00000489540 PHF13Q86YI8 300 aaPredicted RBP18.01■□□□□ 0.47
MDC1-206ENST00000489540 CAMKK1Q8N5S9 505 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 ZBTB44Q8NCP5 570 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 P2RY11Q96G91 374 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 ADAM22Q9P0K1 906 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 TMEM59LQ9UK28 342 aa18.01■□□□□ 0.47
MDC1-206ENST00000489540 GOLGA6L7A0A1B0GV03 622 aa18■□□□□ 0.47
MDC1-206ENST00000489540 A0A1W2PQJ5 194 aa18■□□□□ 0.47
MDC1-206ENST00000489540 KCNU1A8MYU2 1149 aa18■□□□□ 0.47
MDC1-206ENST00000489540 GOLGA8SH3BPF8 625 aa18■□□□□ 0.47
MDC1-206ENST00000489540 M0QYT0 321 aa18■□□□□ 0.47
MDC1-206ENST00000489540 CALB1P05937 261 aa18■□□□□ 0.47
MDC1-206ENST00000489540 TIE1P35590 1138 aa18■□□□□ 0.47
MDC1-206ENST00000489540 DMC1Q14565 340 aa18■□□□□ 0.47
MDC1-206ENST00000489540 SLC25A52Q3SY17 297 aa18■□□□□ 0.47
MDC1-206ENST00000489540 EMC10Q5UCC4 262 aa18■□□□□ 0.47
MDC1-206ENST00000489540 NADSYN1Q6IA69 706 aa18■□□□□ 0.47
MDC1-206ENST00000489540 PPP1R2P3Q6NXS1 205 aa18■□□□□ 0.47
MDC1-206ENST00000489540 SFTPA1Q8IWL2 248 aa18■□□□□ 0.47
MDC1-206ENST00000489540 ZNF557Q8N988 423 aaPredicted RBP18■□□□□ 0.47
MDC1-206ENST00000489540 NT5C3BQ969T7 300 aa18■□□□□ 0.47
MDC1-206ENST00000489540 PGAP3Q96FM1 320 aaPredicted RBP18■□□□□ 0.47
MDC1-206ENST00000489540 NPY6RQ99463 290 aa18■□□□□ 0.47
MDC1-206ENST00000489540 C11orf70Q9BRQ4 267 aa18■□□□□ 0.47
MDC1-206ENST00000489540 SYNJ2BP-COX16A0A087WUM0 186 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 CCDC163A0A0D9SF12 145 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 FAM170AA1A519 330 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 TYW5A2RUC4 315 aaKnown RBP17.99■□□□□ 0.47
MDC1-206ENST00000489540 CBFA2T2O43439 604 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 TIMM44O43615 452 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 MOCS2O96007 188 aaPredicted RBP17.99■□□□□ 0.47
MDC1-206ENST00000489540 HOXD9P28356 352 aaPredicted RBP17.99■□□□□ 0.47
MDC1-206ENST00000489540 SLC6A4P31645 630 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 PRKCIP41743 596 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 NME3Q13232 169 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 E2F5Q15329 346 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 EOGTQ5NDL2 527 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 ACAD10Q6JQN1 1059 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 RFWD3Q6PCD5 774 aa17.99■□□□□ 0.47
MDC1-206ENST00000489540 SND1Q7KZF4 910 aaKnown RBP eCLIP17.99■□□□□ 0.47
MDC1-206ENST00000489540 LONP2Q86WA8 852 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms