RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 ZSWIM1Q9BR11 485 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 TSPAN16Q9UKR8 245 aa12.31□□□□□ -0.44
ACTN4-206ENST00000489451 UNC79Q9P2D8 2635 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 TMEM131Q92545 1883 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 TRIM49BA6NDI0 452 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 GOLGA6L4A6NEF3 574 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 XPO1O14980 1071 aaKnown RBP12.3□□□□□ -0.44
ACTN4-206ENST00000489451 IGLV3-19P01714 112 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 CAPNS1P04632 268 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 C7P10643 843 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 CD6P30203 668 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 CHKAP35790 457 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 TPMTP51580 245 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 SIM1P81133 766 aaPredicted RBP12.3□□□□□ -0.44
ACTN4-206ENST00000489451 COG7P83436 770 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 C19orf57Q0VDD7 668 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 GRIK2Q13002 908 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 SDE2Q6IQ49 451 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 PROSER1Q86XN7 944 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 FMR1NBQ8N0W7 255 aaPredicted RBP12.3□□□□□ -0.44
ACTN4-206ENST00000489451 C1orf216Q8TAB5 229 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 WFDC5Q8TCV5 224 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 DNASE2BQ8WZ79 361 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 CCDC47Q96A33 483 aaKnown RBP12.3□□□□□ -0.44
ACTN4-206ENST00000489451 TOE1Q96GM8 510 aaKnown RBP12.3□□□□□ -0.44
ACTN4-206ENST00000489451 CDK5RAP1Q96SZ6 601 aaKnown RBP12.3□□□□□ -0.44
ACTN4-206ENST00000489451 ITM2CQ9NQX7 267 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 ELOVL2Q9NXB9 296 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 SFMBT1Q9UHJ3 866 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 ZNF510Q9Y2H8 683 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 NEUROG3Q9Y4Z2 214 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 BPTFQ12830 3046 aa12.3□□□□□ -0.44
ACTN4-206ENST00000489451 YJEFN3A6XGL0 299 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 E7ENQ6 273 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 O00370 1275 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 MSI1O43347 362 aaKnown RBP12.29□□□□□ -0.44
ACTN4-206ENST00000489451 OPHN1O60890 802 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 ZBED1O96006 694 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 CALCAP01258 141 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 EPB41P11171 864 aaKnown RBP12.29□□□□□ -0.44
ACTN4-206ENST00000489451 NCAM1P13591 858 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 HLA-EP13747 358 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 HLA-FP30511 346 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 ADIGQ0VDE8 80 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 CUL2Q13617 745 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 PLEKHG6Q3KR16 790 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 COBLL1Q53SF7 1204 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 DCAF17Q5H9S7 520 aaPredicted RBP12.29□□□□□ -0.44
ACTN4-206ENST00000489451 ANKRD40Q6AI12 368 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 ANKS1BQ7Z6G8 1248 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 TADA2BQ86TJ2 420 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 CACUL1Q86Y37 369 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 TMPRSS6Q8IU80 811 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 FMNL3Q8IVF7 1028 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 ENGASEQ8NFI3 743 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 SPATA20Q8TB22 786 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 UBA3Q8TBC4 463 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 TFAP2BQ92481 460 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 EDEM1Q92611 657 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 KAT5Q92993 513 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 SLC35C1Q96A29 364 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 PLD4Q96BZ4 506 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 GPR174Q9BXC1 333 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 DCLK3Q9C098 648 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 TMEM245Q9H330 911 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 SLC32A1Q9H598 525 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 PRDM16Q9HAZ2 1276 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 IL21RQ9HBE5 538 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 STOML2Q9UJZ1 356 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 PTPRBP23467 1997 aa12.29□□□□□ -0.44
ACTN4-206ENST00000489451 FAM221BA6H8Z2 402 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 RNF225M0QZC1 329 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 CETN3O15182 167 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 SLC16A3O15427 465 aaKnown RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 SH3BP5O60239 455 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 TRIM21P19474 475 aaKnown RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 ATXN3P54252 364 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 BCAT1P54687 386 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 PTPRNQ16849 979 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 ZNF658Q5TYW1 1059 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 RABEPKQ7Z6M1 372 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 RAB44Q7Z6P3 723 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 KIAA0907Q7Z7F0 614 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 ADIPOR2Q86V24 386 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 RGL4Q8IZJ4 473 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 ARHGAP18Q8N392 663 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 HDDC3Q8N4P3 179 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 CHCHD4Q8N4Q1 142 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 ZCCHC9Q8N567 271 aaKnown RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 TTC39CQ8N584 583 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 ZNF366Q8N895 744 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 CCDC150Q8NCX0 1101 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 CYB5D2Q8WUJ1 264 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 MYEOVQ96EZ4 313 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 FAM124BQ9H5Z6 455 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 MSRB2Q9Y3D2 182 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 TP53BP1Q12888 1972 aaPredicted RBP12.28□□□□□ -0.44
ACTN4-206ENST00000489451 LAMA5O15230 3695 aa12.28□□□□□ -0.44
ACTN4-206ENST00000489451 NYNRINQ9P2P1 1898 aaKnown RBP12.27□□□□□ -0.44
ACTN4-206ENST00000489451 METTL12A8MUP2 240 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms