RNA–Protein interactions for RNA: ENST00000488973.6

HMG20B-213, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 2,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-213ENST00000488973 ITM2AO43736 263 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 SIN3BO75182 1162 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 CILPO75339 1184 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 KRT19P08727 400 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 C15orf59Q2T9L4 293 aaPredicted RBP20.11■□□□□ 0.81
HMG20B-213ENST00000488973 RAB6CQ53S08 254 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 MFSD4BQ5TF39 518 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 IER5Q5VY09 327 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 ZBTB8OSQ8IWT0 167 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 NME8Q8N427 588 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 CCDC33Q8N5R6 958 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 SHKBP1Q8TBC3 707 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 SLC26A7Q8TE54 656 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 PCYT2Q99447 389 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 ELOVL4Q9GZR5 314 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 RAB6CQ9H0N0 254 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 TSPYL2Q9H2G4 693 aaPredicted RBP20.11■□□□□ 0.81
HMG20B-213ENST00000488973 SMYD3Q9H7B4 428 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 ADAMTS6Q9UKP5 1117 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 GLRA3O75311 464 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 ZNF189O75820 626 aaPredicted RBP20.11■□□□□ 0.81
HMG20B-213ENST00000488973 CCDC166P0CW27 439 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 PROZP22891 400 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 BACE1P56817 501 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 IRX4P78413 519 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 TMEM62Q0P6H9 643 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 TMEM132BQ14DG7 1078 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 RALGPS1Q5JS13 557 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 MPZL3Q6UWV2 235 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 PCDH19Q8TAB3 1148 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 PIP4K2CQ8TBX8 421 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 SLC35B4Q969S0 331 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 DNAJC28Q9NX36 388 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 SPATA7Q9P0W8 599 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 CIDEBQ9UHD4 219 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 EMCNQ9ULC0 261 aa20.11■□□□□ 0.81
HMG20B-213ENST00000488973 SCAF8Q9UPN6 1271 aaKnown RBP20.11■□□□□ 0.81
HMG20B-213ENST00000488973 BRCA1P38398 1863 aaKnown RBP20.1■□□□□ 0.81
HMG20B-213ENST00000488973 LOC285556D6RIA3 1793 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 LYPLA1O75608 230 aaPredicted RBP20.1■□□□□ 0.81
HMG20B-213ENST00000488973 TOP3BO95985 862 aaKnown RBP20.1■□□□□ 0.81
HMG20B-213ENST00000488973 MSLNQ13421 630 aaPredicted RBP20.1■□□□□ 0.81
HMG20B-213ENST00000488973 CDKL3Q8IVW4 592 aaPredicted RBP20.1■□□□□ 0.81
HMG20B-213ENST00000488973 MPP5Q8N3R9 675 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 PPP1R14BQ96C90 147 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 CMTM5Q96DZ9 223 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 NLRP4Q96MN2 994 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 MIS12Q9H081 205 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 NRDE2Q9H7Z3 1164 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 PCDH18Q9HCL0 1135 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 HMGXB4Q9UGU5 601 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 SIX4Q9UIU6 781 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 CDH22Q9UJ99 828 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 SSX2IPQ9Y2D8 614 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 GCATO75600 419 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 VDRP11473 427 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 VCLP18206 1134 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 CDO1Q16878 200 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 LPCAT4Q643R3 524 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 POU5F2Q8N7G0 328 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 GDPD5Q8WTR4 605 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 TRIM56Q9BRZ2 755 aaKnown RBP20.1■□□□□ 0.81
HMG20B-213ENST00000488973 TEX13BQ9BXU2 312 aa20.1■□□□□ 0.81
HMG20B-213ENST00000488973 OPHN1O60890 802 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 TMCC1O94876 653 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 METTL18O95568 372 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 SERPINE1P05121 402 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 SRGAP2CP0DJJ0 459 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 ALOX15P16050 662 aaPredicted RBP20.09■□□□□ 0.81
HMG20B-213ENST00000488973 YY1P25490 414 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 EPHB1P54762 984 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 RPL10AP62906 217 aaKnown RBP20.09■□□□□ 0.81
HMG20B-213ENST00000488973 LAMTOR4Q0VGL1 99 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 LSAMPQ13449 338 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 MXD4Q14582 209 aaPredicted RBP20.09■□□□□ 0.81
HMG20B-213ENST00000488973 N4BP2L1Q5TBK1 243 aaPredicted RBP20.09■□□□□ 0.81
HMG20B-213ENST00000488973 DENND5BQ6ZUT9 1274 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 PPP4R1Q8TF05 950 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 TBCBQ99426 244 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 PTPRHQ9HD43 1115 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 DCDC2Q9UHG0 476 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 TRIP11Q15643 1979 aa20.09■□□□□ 0.81
HMG20B-213ENST00000488973 CASQ2O14958 399 aaPredicted RBP20.08■□□□□ 0.81
HMG20B-213ENST00000488973 PEX1O43933 1283 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 PLIN3O60664 434 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 ALDH1A2O94788 518 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 IL18RAPO95256 599 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 PROCP04070 461 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 GRK2P25098 689 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 IDH3AP50213 366 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 STAT5BP51692 787 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 AQP4P55087 323 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 FAM160B1Q5W0V3 765 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 OR6B2Q6IFH4 312 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 ATP2A3Q93084 1043 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 MMP19Q99542 508 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 ZNF670Q9BS34 389 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 C2orf40Q9H1Z8 148 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 CYP3A43Q9HB55 503 aa20.08■□□□□ 0.81
HMG20B-213ENST00000488973 GOLGB1Q14789 3259 aaKnown RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms