RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 CAMK2BQ13554 666 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 MOGSQ13724 837 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 CCNG2Q16589 344 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 FAAH2Q6GMR7 532 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 XRRA1Q6P2D8 792 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 LRRC74BQ6ZQY2 392 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 KDELC2Q7Z4H8 507 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 PALM2Q8IXS6 379 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 ALLCQ8N6M5 410 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 DQX1Q8TE96 717 aaKnown RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 PYROXD1Q8WU10 500 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 TTC17Q96AE7 1141 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 PPP1R14BQ96C90 147 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 TMEM176AQ96HP8 235 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 SPATA17Q96L03 361 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 TBC1D10AQ9BXI6 508 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 DHX35Q9H5Z1 703 aaKnown RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 RAB6BQ9NRW1 208 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 WHRNQ9P202 907 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 KIAA1522Q9P206 1035 aaPredicted RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 DOLKQ9UPQ8 538 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 PIN4Q9Y237 131 aaKnown RBP7.9□□□□□ -1.15
BEST3-205ENST00000488961 ARL2BPQ9Y2Y0 163 aa7.9□□□□□ -1.15
BEST3-205ENST00000488961 C3orf70A6NLC5 250 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 CXorf49A8MYA2 514 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 GOLGA8TH3BQL2 631 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 CYB561D2O14569 222 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PSTPIP1O43586 416 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 BEST1O76090 585 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 OXSR1O95747 527 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 ALDH2P05091 517 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 CDK4P11802 303 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 EDNRBP24530 442 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 NEK2P51955 445 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 DRG2P55039 364 aaKnown RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 VCPP55072 806 aaKnown RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 ARPC4P59998 168 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 NME3Q13232 169 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 MXD4Q14582 209 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 HIF1AQ16665 826 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 TAPT1Q6NXT6 567 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 KLHL35Q6PF15 583 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 LVRNQ6Q4G3 990 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 ZCCHC23Q6ZST2 131 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 VSIG1Q86XK7 387 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PPM1NQ8N819 430 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 NPLOC4Q8TAT6 608 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 TRAF3IP1Q8TDR0 691 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 FAM172AQ8WUF8 416 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PGM2Q96G03 612 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 APOL2Q9BQE5 337 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 MYLK2Q9H1R3 596 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 SMARCAD1Q9H4L7 1026 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 ERAP1Q9NZ08 941 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 FBXO9Q9UK97 447 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 A0A0G2JND7 137 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 A8MXQ7 604 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 KBTBD13C9JR72 458 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 F8W810 466 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 CAPN9O14815 690 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 ATP2A1O14983 1001 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 TREHO43280 583 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 STK10O94804 968 aaKnown RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 SNAI1O95863 264 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 AMHP03971 560 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 CALB1P05937 261 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 HSPA6P17066 643 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 OCRLQ01968 901 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 TBL3Q12788 808 aaKnown RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 GRIK4Q16099 956 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 GPR162Q16538 588 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PARP6Q2NL67 630 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 CASC4Q6P4E1 433 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 LRRC6Q86X45 466 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 ECHDC2Q86YB7 292 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 LRRC43Q8N309 656 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 C12orf50Q8NA57 414 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 OR6J1Q8NGC5 347 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 AGR3Q8TD06 166 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 GRK7Q8WTQ7 553 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 SREK1Q8WXA9 508 aaKnown RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 ERLEC1Q96DZ1 483 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PPP1R36Q96LQ0 422 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PAAF1Q9BRP4 392 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 SYT17Q9BSW7 474 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PITPNM3Q9BZ71 974 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 SHCBP1LQ9BZQ2 653 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 DRC3Q9H069 523 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 DCLRE1BQ9H816 532 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 PTPRHQ9HD43 1115 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.89□□□□□ -1.15
BEST3-205ENST00000488961 NKIRAS1Q9NYS0 192 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 UBP1Q9NZI7 540 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 TRIOO75962 3097 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 LTBP3Q9NS15 1303 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 TCRBV5S1A1TA0A578 114 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 TSPAN1O60635 241 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 OPHN1O60890 802 aa7.89□□□□□ -1.15
BEST3-205ENST00000488961 ZC3H11AO75152 810 aaKnown RBP eCLIP7.89□□□□□ -1.15
BEST3-205ENST00000488961 SERPINB7O75635 380 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms