RNA–Protein interactions for RNA: ENST00000488935.5

ERGIC3-217, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-217ENST00000488935 SYNCRIPO60506 623 aaKnown RBP16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 CYBBP04839 570 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 HOXD9P28356 352 aaPredicted RBP16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 NUMBP49757 651 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 MCCD1P59942 119 aaPredicted RBP16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 GRIK2Q13002 908 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 SGO2Q562F6 1265 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 DCAF12L1Q5VU92 463 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 PM20D1Q6GTS8 502 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 RFWD3Q6PCD5 774 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 ZC3H3Q8IXZ2 948 aaKnown RBP16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 ZNF276Q8N554 614 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 UBXN6Q9BZV1 441 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 ITM2CQ9NQX7 267 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 CACNA1GO43497 2377 aa16.61■□□□□ 0.25
ERGIC3-217ENST00000488935 CD44P16070 742 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 HLA-FP30511 346 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 HOXD12P35452 270 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 BNC1Q01954 994 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 ENPEPQ07075 957 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 BST2Q10589 180 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 TRIP4Q15650 581 aaPredicted RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 ZNF658Q5TYW1 1059 aaPredicted RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 ARHGAP18Q8N392 663 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 UBR7Q8N806 425 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 RNF139Q8WU17 664 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 UCMAQ8WVF2 138 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 SNX19Q92543 992 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 MYEOVQ96EZ4 313 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 IPO9Q96P70 1041 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 CDK5RAP1Q96SZ6 601 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 TSG101Q99816 390 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 ABCB8Q9NUT2 735 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 USP36Q9P275 1121 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 HESX1Q9UBX0 185 aa16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 EIF2B4Q9UI10 523 aaKnown RBP16.6■□□□□ 0.25
ERGIC3-217ENST00000488935 TMEM131Q92545 1883 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 O00370 1275 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 KCNK3O14649 394 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 STX10O60499 249 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 GJB3O75712 270 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 SYPP08247 313 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 BRD2P25440 801 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 DPP6P42658 865 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 BCAT1P54687 386 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 SLC8A3P57103 927 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 ARID5AQ03989 594 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 ENPP2Q13822 863 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 FNDC3BQ53EP0 1204 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 SYCP2LQ5T4T6 812 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 PMF1Q6P1K2 205 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 TMEM270Q6UE05 265 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 LAYNQ6UX15 382 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 SERPINA13PQ6UXR4 307 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 CHST9Q7L1S5 443 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 MARCH9Q86YJ5 346 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 SIX6OS1Q8N1H7 587 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 CPXM2Q8N436 756 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 PRCCQ92733 491 aaPredicted RBP16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 SLC35C1Q96A29 364 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 PLD4Q96BZ4 506 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 TMA16Q96EY4 203 aaKnown RBP16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 DNAI2Q9GZS0 605 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 C6orf106Q9H6K1 298 aaPredicted RBP16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 STIM2Q9P246 746 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 COQ4Q9Y3A0 265 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 PCDHB4Q9Y5E5 795 aa16.59■□□□□ 0.25
ERGIC3-217ENST00000488935 ZZEF1O43149 2961 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 ACADMP11310 421 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 VDRP11473 427 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 SLC6A4P31645 630 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 CD70P32970 193 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 HARS2P49590 506 aaKnown RBP16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 DAOAP59103 153 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 FKBP3Q00688 224 aaKnown RBP16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 MPPE1Q53F39 396 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 WDR45BQ5MNZ6 344 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 KLHL10Q6JEL2 608 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 RRAGAQ7L523 313 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 ADIPOR2Q86V24 386 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 FAM217AQ8IXS0 508 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 KDF1Q8NAX2 398 aaPredicted RBP16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 ENGASEQ8NFI3 743 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 ZCCHC14Q8WYQ9 949 aaKnown RBP16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 FOXJ1Q92949 421 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 MIS12Q9H081 205 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 DNAAF2Q9NVR5 837 aaKnown RBP16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 ARMCX3Q9UH62 379 aaPredicted RBP16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 PLXNB3Q9ULL4 1909 aa16.58■□□□□ 0.24
ERGIC3-217ENST00000488935 CABIN1Q9Y6J0 2220 aa16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 SRRM3A6NNA2 597 aaPredicted RBP16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 METTL12A8MUP2 240 aa16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 SLC16A3O15427 465 aaKnown RBP16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 TBL1XO60907 577 aa16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 HOXB3P14651 431 aaPredicted RBP16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 GNSP15586 552 aa16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 ACSL1P33121 698 aa16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 FMO5P49326 533 aa16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 CSNK1EP49674 416 aaKnown RBP16.57■□□□□ 0.24
ERGIC3-217ENST00000488935 TRIP6Q15654 476 aaKnown RBP16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms