RNA–Protein interactions for RNA: ENST00000488833.1

ATG9A-222, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 487 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-222ENST00000488833 ELOVL2Q9NXB9 296 aa19.11■□□□□ 0.65
ATG9A-222ENST00000488833 SLC6A14Q9UN76 642 aa19.11■□□□□ 0.65
ATG9A-222ENST00000488833 WDR3Q9UNX4 943 aaKnown RBP eCLIP19.11■□□□□ 0.65
ATG9A-222ENST00000488833 CKAP5Q14008 2032 aa19.11■□□□□ 0.65
ATG9A-222ENST00000488833 PCDH15Q96QU1 1955 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 BIN1O00499 593 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 SYNCRIPO60506 623 aaKnown RBP19.1■□□□□ 0.65
ATG9A-222ENST00000488833 SERPINF2P08697 491 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 BRD2P25440 801 aaKnown RBP19.1■□□□□ 0.65
ATG9A-222ENST00000488833 ATXN3P54252 364 aaPredicted RBP19.1■□□□□ 0.65
ATG9A-222ENST00000488833 ZNF234Q14588 700 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 E2F5Q15329 346 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 MPPE1Q53F39 396 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 SCML4Q8N228 414 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 RBBP8NLQ8NC74 664 aaPredicted RBP19.1■□□□□ 0.65
ATG9A-222ENST00000488833 SORCS1Q8WY21 1168 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 ZSWIM1Q9BR11 485 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 PRDM16Q9HAZ2 1276 aa19.1■□□□□ 0.65
ATG9A-222ENST00000488833 BICDL2A1A5D9 508 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 PPP1R3GB7ZBB8 358 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 PIK3R2O00459 728 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 P4HA2O15460 535 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 CALCAP01258 141 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 CEACAM1P13688 526 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 BMP6P22004 513 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 HOXD9P28356 352 aaPredicted RBP19.09■□□□□ 0.65
ATG9A-222ENST00000488833 CD6P30203 668 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 ZNF132P52740 706 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 ARID5AQ03989 594 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 ENPP2Q13822 863 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 STILQ15468 1287 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 CNGA2Q16280 664 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 PMF1Q6P1K2 205 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 ARHGEF19Q8IW93 802 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 RGL4Q8IZJ4 473 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 LMO3Q8TAP4 145 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 FOXJ1Q92949 421 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 MKRN2Q9H000 416 aaKnown RBP19.09■□□□□ 0.65
ATG9A-222ENST00000488833 CAPN10Q9HC96 672 aa19.09■□□□□ 0.65
ATG9A-222ENST00000488833 RNF225M0QZC1 329 aaPredicted RBP19.08■□□□□ 0.64
ATG9A-222ENST00000488833 KRT37O76014 449 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 LATS1O95835 1130 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 EPHX1P07099 455 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 PRKCHP24723 683 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 STX17P56962 302 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 ZNF445P59923 1031 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 FOXC1Q12948 553 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 MORC3Q14149 939 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 ADGRF1Q5T601 910 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 TMEM215Q68D42 235 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 MSANTD2Q6P1R3 559 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 SERPINA13PQ6UXR4 307 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 RRAGAQ7L523 313 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 CACUL1Q86Y37 369 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 SLC35F5Q8WV83 523 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 IRGQQ8WZA9 623 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 ZNF419Q96HQ0 510 aaPredicted RBP19.08■□□□□ 0.64
ATG9A-222ENST00000488833 SLC32A1Q9H598 525 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 USP36Q9P275 1121 aaKnown RBP19.08■□□□□ 0.64
ATG9A-222ENST00000488833 STOML2Q9UJZ1 356 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 IGF2RP11717 2491 aa19.08■□□□□ 0.64
ATG9A-222ENST00000488833 MEI4A8MW99 385 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 GABBR2O75899 941 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 LTFP02788 710 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 NCAM1P13591 858 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 GCNT1Q02742 428 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 KCNH2Q12809 1159 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 WDR45BQ5MNZ6 344 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 SYCP2LQ5T4T6 812 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 FOXR2Q6PJQ5 311 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 METTL3Q86U44 580 aaKnown RBP19.07■□□□□ 0.64
ATG9A-222ENST00000488833 TMPRSS6Q8IU80 811 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 TRIM59Q8IWR1 403 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 HDDC3Q8N4P3 179 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 MINDY1Q8N5J2 469 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 WFIKKN2Q8TEU8 576 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 CLEC4CQ8WTT0 213 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 PRCCQ92733 491 aaPredicted RBP19.07■□□□□ 0.64
ATG9A-222ENST00000488833 GOLGA1Q92805 767 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 TMA16Q96EY4 203 aaKnown RBP19.07■□□□□ 0.64
ATG9A-222ENST00000488833 SIPA1Q96FS4 1042 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 TOE1Q96GM8 510 aaKnown RBP19.07■□□□□ 0.64
ATG9A-222ENST00000488833 SUSD2Q9UGT4 822 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 PCNX2A6NKB5 2137 aa19.07■□□□□ 0.64
ATG9A-222ENST00000488833 MUC22E2RYF6 1773 aaPredicted RBP19.06■□□□□ 0.64
ATG9A-222ENST00000488833 ARHGAP33O14559 1287 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 TIMM44O43615 452 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 OPHN1O60890 802 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 GADD45BO75293 160 aaPredicted RBP19.06■□□□□ 0.64
ATG9A-222ENST00000488833 FBXO21O94952 628 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 GNA14O95837 355 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 HLA-EP13747 358 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 HLA-FP30511 346 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 SGSHP51688 502 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 PAK1Q13153 545 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 FNDC3BQ53EP0 1204 aaKnown RBP19.06■□□□□ 0.64
ATG9A-222ENST00000488833 CHST9Q7L1S5 443 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 EHBP1Q8NDI1 1231 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 OR2I1PQ8NGU4 316 aa19.06■□□□□ 0.64
ATG9A-222ENST00000488833 HSFY1Q96LI6 401 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms