RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 ADAM17P78536 824 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 SPIDRQ14159 915 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 RGS21Q2M5E4 152 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 TEX44Q53QW1 395 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 SNX32Q86XE0 403 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 SNX31Q8N9S9 440 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 BORCS5Q969J3 196 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 CXorf21Q9HAI6 301 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 OLAHQ9NV23 265 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ZNF358Q9NW07 568 aa16.66■□□□□ 0.26
MCF2L-229ENST00000488765 ADRB2P07550 413 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 NPR1P16066 1061 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 SLC1A6P48664 564 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 BMT2Q1RMZ1 405 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 ZNF394Q53GI3 561 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 DEPDC1Q5TB30 811 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 DDX1Q92499 740 aaKnown RBP16.65■□□□□ 0.26
MCF2L-229ENST00000488765 C7orf26Q96N11 449 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 NCKIPSDQ9NZQ3 722 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 RIMS3Q9UJD0 308 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 SLC27A5Q9Y2P5 690 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 A0A0B4J269 797 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 TRIM64CA6NLI5 447 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 NRP1O14786 923 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 MCF2P10911 925 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 ARRB2P32121 409 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 TPTEP56180 551 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 SLC10A2Q12908 348 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-229ENST00000488765 TUBB3Q13509 450 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 ZNF829Q3KNS6 432 aaPredicted RBP16.65■□□□□ 0.26
MCF2L-229ENST00000488765 TIGD2Q4W5G0 525 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 SLC27A3Q5K4L6 730 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 TRMT10BQ6PF06 316 aaKnown RBP16.65■□□□□ 0.26
MCF2L-229ENST00000488765 SH2D5Q6ZV89 423 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 CXorf38Q8TB03 319 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 MAELQ96JY0 434 aaKnown RBP16.65■□□□□ 0.26
MCF2L-229ENST00000488765 NOL11Q9H8H0 719 aaKnown RBP16.65■□□□□ 0.26
MCF2L-229ENST00000488765 TBC1D22BQ9NU19 505 aa16.65■□□□□ 0.26
MCF2L-229ENST00000488765 CST8O60676 142 aa16.64■□□□□ 0.26
MCF2L-229ENST00000488765 SHMT1P34896 483 aa16.64■□□□□ 0.26
MCF2L-229ENST00000488765 NR4A2P43354 598 aa16.64■□□□□ 0.26
MCF2L-229ENST00000488765 PPIL6Q8IXY8 311 aa16.64■□□□□ 0.26
MCF2L-229ENST00000488765 TNS4Q8IZW8 715 aa16.64■□□□□ 0.26
MCF2L-229ENST00000488765 SLITRK1Q96PX8 696 aa16.64■□□□□ 0.26
MCF2L-229ENST00000488765 SOX17Q9H6I2 414 aaPredicted RBP16.64■□□□□ 0.26
MCF2L-229ENST00000488765 C20orf96Q9NUD7 363 aaPredicted RBP16.64■□□□□ 0.26
MCF2L-229ENST00000488765 C6orf203Q9P0P8 240 aaPredicted RBP16.64■□□□□ 0.26
MCF2L-229ENST00000488765 PCSK1NQ9UHG2 260 aa16.64■□□□□ 0.26
MCF2L-229ENST00000488765 CFAP99D6REC4 459 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 AQP9O43315 295 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 GH2P01242 217 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 PMS2P3Q13401 168 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 MGAT5BQ3V5L5 792 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 TMEM198Q66K66 360 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 C1orf186Q6ZWK4 172 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 OFCC1Q8IZS5 231 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 CADM3Q8N126 398 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 PSD4Q8NDX1 1056 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 SLC44A1Q8WWI5 657 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 CMTM5Q96DZ9 223 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 FIZ1Q96SL8 496 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 KLC2Q9H0B6 622 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 SMYD2Q9NRG4 433 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 ADA2Q9NZK5 511 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 HSPBP1Q9NZL4 362 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 SSX2IPQ9Y2D8 614 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 GOLGA8TH3BQL2 631 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 AGRPO00253 132 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 GMNNO75496 209 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 MAGP20916 626 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 GSSP48637 474 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 ARPC4P59998 168 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 QRICH1Q2TAL8 776 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 CCDC153Q494R4 210 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 SLFN13Q68D06 897 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 DSG4Q86SJ6 1040 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 TTLL6Q8N841 843 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 SHC3Q92529 594 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 PRMT6Q96LA8 375 aaPredicted RBP16.64■□□□□ 0.25
MCF2L-229ENST00000488765 MCEEQ96PE7 176 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 GID8Q9NWU2 228 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 IGSF9Q9P2J2 1179 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 SHOC2Q9UQ13 582 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 GPSM3Q9Y4H4 160 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 NRAPQ86VF7 1730 aa16.64■□□□□ 0.25
MCF2L-229ENST00000488765 SAC3D1A6NKF1 404 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 H3BMQ9 156 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SLC18A2Q05940 514 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 ORC2Q13416 577 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 MAMLD1Q13495 774 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 NXNQ6DKJ4 435 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 CDAN1Q8IWY9 1227 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SREK1Q8WXA9 508 aaKnown RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 TANKQ92844 425 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 COG8Q96MW5 612 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 MTG1Q9BT17 334 aaPredicted RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 PALMDQ9NP74 551 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 SSU72Q9NP77 194 aaKnown RBP16.63■□□□□ 0.25
MCF2L-229ENST00000488765 DMAC2Q9NW81 257 aa16.63■□□□□ 0.25
MCF2L-229ENST00000488765 ROBO3Q96MS0 1386 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms