RNA–Protein interactions for RNA: ENST00000488571.1

SNU13-208, Transcript of small nuclear ribonucleoprotein 13, humanhuman

TSL 5

Gene SNU13, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-208ENST00000488571 PRKCHP24723 683 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 OXTRP30559 389 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 CORO1AP31146 461 aaKnown RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 CHKAP35790 457 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 FOXD4L6Q3SYB3 417 aaPredicted RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 KMT5BQ4FZB7 885 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 PPP1R26Q5T8A7 1209 aaPredicted RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 TMEM215Q68D42 235 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 FOXD4L3Q6VB84 417 aaPredicted RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 DBX2Q6ZNG2 339 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 CACUL1Q86Y37 369 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 TAS1R2Q8TE23 839 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 SIPA1Q96FS4 1042 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 DUSP16Q9BY84 665 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 MIR1-1HGQ9H1L0 117 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 CCDC86Q9H6F5 360 aaKnown RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 GAREM1Q9H706 876 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 CYP3A43Q9HB55 503 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 NPDC1Q9NQX5 325 aaPredicted RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 TM7SF3Q9NS93 570 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 ELOVL2Q9NXB9 296 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 KIAA1522Q9P206 1035 aaPredicted RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 SERTAD1Q9UHV2 236 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 EIF2B4Q9UI10 523 aaKnown RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 RASAL2Q9UJF2 1139 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 AGO1Q9UL18 857 aaKnown RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 APOBEC2Q9Y235 224 aaKnown RBP11.91□□□□□ -0.5
SNU13-208ENST00000488571 ZNF510Q9Y2H8 683 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 TMEM131Q92545 1883 aa11.91□□□□□ -0.5
SNU13-208ENST00000488571 IGSF10Q6WRI0 2623 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 SMG1Q96Q15 3661 aaKnown RBP11.9□□□□□ -0.5
SNU13-208ENST00000488571 BCAT2O15382 392 aaPredicted RBP11.9□□□□□ -0.5
SNU13-208ENST00000488571 HMBSP08397 361 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 SLFN14P0C7P3 912 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 RALAP11233 206 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 CD58P19256 250 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 ME1P48163 572 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 GCLMP48507 274 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 COG7P83436 770 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 PPP3CAQ08209 521 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 EFEMP1Q12805 493 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 COL28A1Q2UY09 1125 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 HLA-BQ31612 363 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 SOWAHCQ53LP3 525 aaPredicted RBP11.9□□□□□ -0.5
SNU13-208ENST00000488571 FOXD4L5Q5VV16 416 aaPredicted RBP11.9□□□□□ -0.5
SNU13-208ENST00000488571 CEP135Q66GS9 1140 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 ANKS1BQ7Z6G8 1248 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 TADA2BQ86TJ2 420 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 PDZD3Q86UT5 571 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 DENND1CQ8IV53 801 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 FAM217AQ8IXS0 508 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 CPXM2Q8N436 756 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 SETD7Q8WTS6 366 aaKnown RBP11.9□□□□□ -0.5
SNU13-208ENST00000488571 UCMAQ8WVF2 138 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 FOXD4L4Q8WXT5 416 aaPredicted RBP11.9□□□□□ -0.5
SNU13-208ENST00000488571 SORCS1Q8WY21 1168 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 PRCCQ92733 491 aaPredicted RBP11.9□□□□□ -0.5
SNU13-208ENST00000488571 PAGE5Q96GU1 130 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 DCLK3Q9C098 648 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 EXOC1Q9NV70 894 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 FAM13BQ9NYF5 915 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 NUMA1Q14980 2115 aa11.9□□□□□ -0.5
SNU13-208ENST00000488571 APC2O95996 2303 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 A0A1B0GVT2 93 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 MAPK13O15264 365 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 SYNCRIPO60506 623 aaKnown RBP11.89□□□□□ -0.51
SNU13-208ENST00000488571 CER1O95813 267 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 EPHX1P07099 455 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 ATXN1LP0C7T5 689 aaKnown RBP11.89□□□□□ -0.51
SNU13-208ENST00000488571 TRIM49P0CI25 452 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 TRIM49CP0CI26 452 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 HLA-EP13747 358 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 TRIM21P19474 475 aaKnown RBP11.89□□□□□ -0.51
SNU13-208ENST00000488571 MATKP42679 507 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 VAMP7P51809 220 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 KCNC4Q03721 635 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 EIF4HQ15056 248 aaKnown RBP11.89□□□□□ -0.51
SNU13-208ENST00000488571 RAB41Q5JT25 222 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 TMPRSS7Q7RTY8 843 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 MARCH9Q86YJ5 346 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 CEP57L1Q8IYX8 460 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 CDK5RAP1Q96SZ6 601 aaKnown RBP11.89□□□□□ -0.51
SNU13-208ENST00000488571 NUP58Q9BVL2 599 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 SLC2A11Q9BYW1 496 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 IMPG2Q9BZV3 1241 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 NIF3L1Q9GZT8 377 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 MARCH2Q9P0N8 246 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 TRAF3IP3Q9Y228 551 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 BTBD3Q9Y2F9 522 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 FRMD4BQ9Y2L6 1034 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 RAXQ9Y2V3 346 aa11.89□□□□□ -0.51
SNU13-208ENST00000488571 FLRT2O43155 660 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 KIF20AO95235 890 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 ACADMP11310 421 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 PDIA4P13667 645 aaKnown RBP11.88□□□□□ -0.51
SNU13-208ENST00000488571 HOXD9P28356 352 aaPredicted RBP11.88□□□□□ -0.51
SNU13-208ENST00000488571 ACSL1P33121 698 aa11.88□□□□□ -0.51
SNU13-208ENST00000488571 CSNK1EP49674 416 aaKnown RBP11.88□□□□□ -0.51
SNU13-208ENST00000488571 CAMK2GQ13555 558 aaPredicted RBP11.88□□□□□ -0.51
SNU13-208ENST00000488571 ZNF394Q53GI3 561 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms