RNA–Protein interactions for RNA: ENST00000488522.1

TTC3-221, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-221ENST00000488522 SLC2A11Q9BYW1 496 aa12.87□□□□□ -0.35
TTC3-221ENST00000488522 UBXN6Q9BZV1 441 aa12.87□□□□□ -0.35
TTC3-221ENST00000488522 NIF3L1Q9GZT8 377 aa12.87□□□□□ -0.35
TTC3-221ENST00000488522 TOR4AQ9NXH8 423 aa12.87□□□□□ -0.35
TTC3-221ENST00000488522 PLK2Q9NYY3 685 aa12.87□□□□□ -0.35
TTC3-221ENST00000488522 TRAF3IP3Q9Y228 551 aa12.87□□□□□ -0.35
TTC3-221ENST00000488522 PCDHB9Q9Y5E1 797 aa12.87□□□□□ -0.35
TTC3-221ENST00000488522 MEI4A8MW99 385 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 FLRT2O43155 660 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 RALAP11233 206 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 MAOBP27338 520 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 PIK3CAP42336 1068 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 DPYDQ12882 1025 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 PNOCQ13519 176 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 ZNF234Q14588 700 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 RAB41Q5JT25 222 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 DCAF12L1Q5VU92 463 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 TMPRSS7Q7RTY8 843 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 SLCO6A1Q86UG4 719 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 TMPRSS6Q8IU80 811 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 CCDC47Q96A33 483 aaKnown RBP12.86□□□□□ -0.35
TTC3-221ENST00000488522 SIPA1Q96FS4 1042 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 NUP58Q9BVL2 599 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 GPR174Q9BXC1 333 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 CCDC86Q9H6F5 360 aaKnown RBP12.86□□□□□ -0.35
TTC3-221ENST00000488522 APOBEC3GQ9HC16 384 aaKnown RBP12.86□□□□□ -0.35
TTC3-221ENST00000488522 SCUBE2Q9NQ36 999 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 ELOVL2Q9NXB9 296 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 NAGPAQ9UK23 515 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 NUDT5Q9UKK9 219 aa12.86□□□□□ -0.35
TTC3-221ENST00000488522 AGO1Q9UL18 857 aaKnown RBP12.86□□□□□ -0.35
TTC3-221ENST00000488522 FNDC3AQ9Y2H6 1198 aaKnown RBP12.86□□□□□ -0.35
TTC3-221ENST00000488522 NUMA1Q14980 2115 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 BCAT2O15382 392 aaPredicted RBP12.85□□□□□ -0.35
TTC3-221ENST00000488522 SMC2O95347 1197 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 CORO1AP31146 461 aaKnown RBP12.85□□□□□ -0.35
TTC3-221ENST00000488522 MATKP42679 507 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 CAMK2GQ13555 558 aaPredicted RBP12.85□□□□□ -0.35
TTC3-221ENST00000488522 CAMK4Q16566 473 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 KMT5BQ4FZB7 885 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 TMEM215Q68D42 235 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 ARHGAP18Q8N392 663 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 PNPLA1Q8N8W4 532 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 PRCCQ92733 491 aaPredicted RBP12.85□□□□□ -0.35
TTC3-221ENST00000488522 BHMTQ93088 406 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 CDC6Q99741 560 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 IMPG2Q9BZV3 1241 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 NUP62CLQ9H1M0 184 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 CLSTN2Q9H4D0 955 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 FBRSQ9HAH7 460 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 IL21RQ9HBE5 538 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 TM7SF3Q9NS93 570 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 EXOC1Q9NV70 894 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 RMND1Q9NWS8 449 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 STOML2Q9UJZ1 356 aa12.85□□□□□ -0.35
TTC3-221ENST00000488522 PAPSS1O43252 624 aaPredicted RBP12.84□□□□□ -0.35
TTC3-221ENST00000488522 TIMM44O43615 452 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 CLSTN1O94985 981 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 PRKCHP24723 683 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 VAMP7P51809 220 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 ZNF445P59923 1031 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 PPP3CAQ08209 521 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 TRIP4Q15650 581 aaPredicted RBP12.84□□□□□ -0.35
TTC3-221ENST00000488522 PPP1R26Q5T8A7 1209 aaPredicted RBP12.84□□□□□ -0.35
TTC3-221ENST00000488522 ARHGAP17Q68EM7 881 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 PM20D1Q6GTS8 502 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 INTS8Q75QN2 995 aaKnown RBP12.84□□□□□ -0.35
TTC3-221ENST00000488522 KIAA0907Q7Z7F0 614 aaPredicted RBP12.84□□□□□ -0.35
TTC3-221ENST00000488522 PDZD3Q86UT5 571 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 TTC39CQ8N584 583 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.84□□□□□ -0.35
TTC3-221ENST00000488522 OR2T3Q8NH03 318 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 TAS1R2Q8TE23 839 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 SMARCE1Q969G3 411 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 JAKMIP2Q96AA8 810 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 PLD4Q96BZ4 506 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 ERLEC1Q96DZ1 483 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 DNAI2Q9GZS0 605 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 TMEM245Q9H330 911 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 GAREM1Q9H706 876 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 RASAL2Q9UJF2 1139 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 CLEC4EQ9ULY5 219 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 FRMD4BQ9Y2L6 1034 aa12.84□□□□□ -0.35
TTC3-221ENST00000488522 URB1O60287 2271 aaKnown RBP12.84□□□□□ -0.35
TTC3-221ENST00000488522 GOLGA4Q13439 2230 aaKnown RBP12.84□□□□□ -0.35
TTC3-221ENST00000488522 COL5A1P20908 1838 aaPredicted RBP12.83□□□□□ -0.35
TTC3-221ENST00000488522 TMEM131Q92545 1883 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 SYNCRIPO60506 623 aaKnown RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 LATS1O95835 1130 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 CYBBP04839 570 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 HOXD9P28356 352 aaPredicted RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 AFF3P51826 1226 aaKnown RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 ZBTB16Q05516 673 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 EFEMP1Q12805 493 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 HLA-BQ31612 363 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 SOWAHCQ53LP3 525 aaPredicted RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 BHLHA9Q7RTU4 235 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 WFIKKN2Q8TEU8 576 aa12.83□□□□□ -0.36
TTC3-221ENST00000488522 ERCC4Q92889 916 aaPredicted RBP12.83□□□□□ -0.36
TTC3-221ENST00000488522 GSDMAQ96QA5 445 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms