RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 NUP205Q92621 2012 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 TSPAN3O60637 253 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 NDUFS2O75306 463 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 GABBR2O75899 941 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 IL12RB1P42701 662 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 ARID5AQ03989 594 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 ENPP2Q13822 863 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 DUOXA1Q1HG43 343 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 FUT11Q495W5 492 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 PEAR1Q5VY43 1037 aaPredicted RBP23.57■■□□□ 1.36
PTPN4-211ENST00000488279 PRDM16Q9HAZ2 1276 aa23.57■■□□□ 1.36
PTPN4-211ENST00000488279 ATXN2Q99700 1313 aaKnown RBP23.57■■□□□ 1.36
PTPN4-211ENST00000488279 MSI1O43347 362 aaKnown RBP23.56■■□□□ 1.36
PTPN4-211ENST00000488279 FBXO21O94952 628 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 CALCAP01258 141 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 CFIP05156 583 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 HOXD9P28356 352 aaPredicted RBP23.56■■□□□ 1.36
PTPN4-211ENST00000488279 NOVA1P51513 510 aaKnown RBP23.56■■□□□ 1.36
PTPN4-211ENST00000488279 ZNF234Q14588 700 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 UAP1L1Q3KQV9 507 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 MSANTD2Q6P1R3 559 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 RABEPKQ7Z6M1 372 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 METTL3Q86U44 580 aaKnown RBP23.56■■□□□ 1.36
PTPN4-211ENST00000488279 UNC45BQ8IWX7 931 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 TRIML1Q8N9V2 468 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 INTS2Q9H0H0 1204 aaKnown RBP23.56■■□□□ 1.36
PTPN4-211ENST00000488279 SLC6A14Q9UN76 642 aa23.56■■□□□ 1.36
PTPN4-211ENST00000488279 LTFP02788 710 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 KRT5P13647 590 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 ENGP17813 658 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 MAPK8P45983 427 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 GFPT1Q06210 699 aaPredicted RBP23.55■■□□□ 1.36
PTPN4-211ENST00000488279 SH3PXD2AQ5TCZ1 1133 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 SORCS1Q8WY21 1168 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 ZNF419Q96HQ0 510 aaPredicted RBP23.55■■□□□ 1.36
PTPN4-211ENST00000488279 HSPA12BQ96MM6 686 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 KREMEN1Q96MU8 473 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 MIS12Q9H081 205 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 UBE2TQ9NPD8 197 aaPredicted RBP23.55■■□□□ 1.36
PTPN4-211ENST00000488279 ANGPTL2Q9UKU9 493 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 CNTN6Q9UQ52 1028 aa23.55■■□□□ 1.36
PTPN4-211ENST00000488279 TPRP12270 2363 aaKnown RBP23.54■■□□□ 1.36
PTPN4-211ENST00000488279 SERPINF2P08697 491 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 PMLP29590 882 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 CD6P30203 668 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 SLC11A2P49281 568 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 ATXN3P54252 364 aaPredicted RBP23.54■■□□□ 1.36
PTPN4-211ENST00000488279 SYCP2LQ5T4T6 812 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 NUGGCQ68CJ6 796 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 TMEM215Q68D42 235 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 SERPINA13PQ6UXR4 307 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 TMPRSS6Q8IU80 811 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 SLC41A1Q8IVJ1 513 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 SCUBE3Q8IX30 993 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 CLEC4CQ8WTT0 213 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 FOXJ1Q92949 421 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 MKRN2Q9H000 416 aaKnown RBP23.54■■□□□ 1.36
PTPN4-211ENST00000488279 ITM2CQ9NQX7 267 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 KIAA1468Q9P260 1216 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 PLA2G4CQ9UP65 541 aa23.54■■□□□ 1.36
PTPN4-211ENST00000488279 GON4LQ3T8J9 2241 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 IGLV3-27P01718 113 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 NCAM1P13591 858 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 CEACAM1P13688 526 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 CSRP1P21291 193 aaKnown RBP23.53■■□□□ 1.36
PTPN4-211ENST00000488279 HLA-FP30511 346 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 RING1Q06587 406 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 CREBRFQ8IUR6 639 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 RGL4Q8IZJ4 473 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 AZIN2Q96A70 460 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 SIPA1Q96FS4 1042 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 IRX2Q9BZI1 471 aaPredicted RBP23.53■■□□□ 1.36
PTPN4-211ENST00000488279 CD93Q9NPY3 652 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 ST7Q9NRC1 585 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 RWDD2AQ9UIY3 292 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 ACACBO00763 2458 aa23.53■■□□□ 1.36
PTPN4-211ENST00000488279 GIPC1O14908 333 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 SART1O43290 800 aaKnown RBP23.52■■□□□ 1.36
PTPN4-211ENST00000488279 MED7O43513 233 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 EPHX1P07099 455 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 PRKCHP24723 683 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 OXTRP30559 389 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 GPD2P43304 727 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 ACADSBP45954 432 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 TBX4P57082 545 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 UBE2HP62256 183 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 CAMK4Q16566 473 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 MPP7Q5T2T1 576 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 ENOSF1Q7L5Y1 443 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 WFIKKN2Q8TEU8 576 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 PRCCQ92733 491 aaPredicted RBP23.52■■□□□ 1.36
PTPN4-211ENST00000488279 TOE1Q96GM8 510 aaKnown RBP23.52■■□□□ 1.36
PTPN4-211ENST00000488279 GTPBP2Q9BX10 602 aaKnown RBP23.52■■□□□ 1.36
PTPN4-211ENST00000488279 CAPN10Q9HC96 672 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 ABCB8Q9NUT2 735 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 USP36Q9P275 1121 aaKnown RBP23.52■■□□□ 1.36
PTPN4-211ENST00000488279 PLXND1Q9Y4D7 1925 aa23.52■■□□□ 1.36
PTPN4-211ENST00000488279 IRAK2O43187 625 aa23.51■■□□□ 1.35
PTPN4-211ENST00000488279 ACSL4O60488 711 aa23.51■■□□□ 1.35
PTPN4-211ENST00000488279 ACADMP11310 421 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms