RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 TTC30AQ86WT1 665 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 SLC2A14Q8TDB8 520 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 BCL7CQ8WUZ0 217 aaPredicted RBP14.2□□□□□ -0.14
COPS7B-221ENST00000488111 TNIP3Q96KP6 325 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 TMEM209Q96SK2 561 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 COLEC11Q9BWP8 271 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 UBE2OQ9C0C9 1292 aaKnown RBP14.2□□□□□ -0.14
COPS7B-221ENST00000488111 CWH43Q9H720 699 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 CRTAC1Q9NQ79 661 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 GTF3C4Q9UKN8 822 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 ADAM28Q9UKQ2 775 aa14.2□□□□□ -0.14
COPS7B-221ENST00000488111 MTA2O94776 668 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 RRM1P23921 792 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 IVDP26440 423 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 GPD2P43304 727 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 SLC18A1P54219 525 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 KRT17Q04695 432 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 RCN1Q15293 331 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 ZRSR2Q15696 482 aaKnown RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 GSTA3Q16772 222 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 TMEM240Q5SV17 173 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 FAM171A1Q5VUB5 890 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 ARMC3Q5W041 872 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 LRRC74BQ6ZQY2 392 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 MON1BQ7L1V2 547 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 ARHGAP18Q8N392 663 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 RIBC1Q8N443 379 aaPredicted RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 MAML1Q92585 1016 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 ZNF689Q96CS4 500 aaPredicted RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 SNF8Q96H20 258 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 HTATIP2Q9BUP3 242 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 CYLDQ9NQC7 956 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 CHCHD3Q9NX63 227 aaKnown RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 SLC4A7Q9Y6M7 1214 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 TMEM110-MUSTN1A8MSY1 372 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 TMEM189-UBE2V1I3L0A0 370 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 EFCAB14O75071 495 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 BAIAP3O94812 1187 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 LSM8O95777 96 aaKnown RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 CYP11A1P05108 521 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 PYGBP11216 843 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 ALDH7A1P49419 539 aaKnown RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 SESN3P58005 492 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 CAV1Q03135 178 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 YWHAHQ04917 246 aaPredicted RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 SLC34A1Q06495 639 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 AP1B1Q10567 949 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 BTG3Q14201 252 aaPredicted RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 STAT4Q14765 748 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 CTC1Q2NKJ3 1217 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 TAF1BQ53T94 588 aaPredicted RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 CYP4A22Q5TCH4 519 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 OR10T2Q8NGX3 314 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 SPOCK2Q92563 424 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 YME1L1Q96TA2 773 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 CADM1Q9BY67 442 aaKnown RBP14.19□□□□□ -0.14
COPS7B-221ENST00000488111 LHX5Q9H2C1 402 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 ZWILCHQ9H900 591 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 TBK1Q9UHD2 729 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 PCDHB8Q9UN66 801 aa14.19□□□□□ -0.14
COPS7B-221ENST00000488111 PRPF4O43172 522 aaKnown RBP eCLIP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 FAM163BP0C2L3 166 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 MMP8P22894 467 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 GSTT1P30711 240 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 CDH5P33151 784 aaPredicted RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 RGS7P49802 495 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 PTP4A2Q12974 167 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 PTK6Q13882 451 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 PDK4Q16654 411 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 PTPN20Q4JDL3 420 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 PABPC1LQ4VXU2 614 aaKnown RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 SYDE1Q6ZW31 735 aaPredicted RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 TAS1R1Q7RTX1 841 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 ZC3H18Q86VM9 953 aaKnown RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 PHF13Q86YI8 300 aaPredicted RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 BTBD6Q96KE9 485 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 GBP5Q96PP8 586 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 CPXM1Q96SM3 734 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 CCDC28BQ9BUN5 200 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 SLCO1B3Q9NPD5 702 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 ZFP69BQ9UJL9 534 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 RASA4BC9J798 803 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 C2CD2LO14523 706 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 RASA4O43374 803 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 CREB3O43889 395 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 OR4Q2P0C623 313 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 SERPINB4P48594 390 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 RABGGTBP53611 331 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 ITGA8P53708 1063 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 ADCY1Q08828 1119 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 SPARCL1Q14515 664 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 KPNB1Q14974 876 aaKnown RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 ARHGAP17Q68EM7 881 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 FUT10Q6P4F1 479 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 CCNJLQ8IV13 435 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 NR1H4Q96RI1 486 aaPredicted RBP14.18□□□□□ -0.14
COPS7B-221ENST00000488111 TMEM175Q9BSA9 504 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 MED10Q9BTT4 135 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 NUP85Q9BW27 656 aa14.18□□□□□ -0.14
COPS7B-221ENST00000488111 RC3H2Q9HBD1 1191 aaKnown RBP14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms