RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 ELF2Q15723 593 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 INPP5JQ15735 1006 aaPredicted RBP4.93□□□□□ -1.62
SMC4-219ENST00000487747 PPP4R4Q6NUP7 873 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 KRT28Q7Z3Y7 464 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 LRRC46Q96FV0 321 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 PAPOLBQ9NRJ5 636 aaKnown RBP4.93□□□□□ -1.62
SMC4-219ENST00000487747 GJB4Q9NTQ9 266 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 AGO2Q9UKV8 859 aaKnown RBP4.93□□□□□ -1.62
SMC4-219ENST00000487747 CORO2BQ9UQ03 480 aa4.93□□□□□ -1.62
SMC4-219ENST00000487747 A6NNC1 897 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 FOXN3O00409 490 aaPredicted RBP4.92□□□□□ -1.62
SMC4-219ENST00000487747 ALADP13716 330 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 TFEBP19484 476 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 HOXA11P31270 313 aaPredicted RBP4.92□□□□□ -1.62
SMC4-219ENST00000487747 P2RX3P56373 397 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 GPS1Q13098 491 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 SMTNL2Q2TAL5 461 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 C14orf80Q86SX3 495 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 RHPN2Q8IUC4 686 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 KRT78Q8N1N4 520 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 JDP2Q8WYK2 163 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 PHKBQ93100 1093 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 TSR2Q969E8 191 aaKnown RBP4.92□□□□□ -1.62
SMC4-219ENST00000487747 SENP7Q9BQF6 1050 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 TTLL2Q9BWV7 592 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 AAMDCQ9H7C9 122 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 SNX13Q9Y5W8 968 aa4.92□□□□□ -1.62
SMC4-219ENST00000487747 LACTBL1A8MY62 500 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 NGFRP08138 427 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 TNFRSF8P28908 595 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 POLD2P49005 469 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 DMWDQ09019 674 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 PTGR1Q14914 329 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 ASPHD1Q5U4P2 390 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 MYO1HQ8N1T3 1032 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 ABHD5Q8WTS1 349 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 IQCDQ96DY2 449 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 RNF26Q9BY78 433 aaPredicted RBP4.91□□□□□ -1.62
SMC4-219ENST00000487747 UNKQ9C0B0 810 aaKnown RBP4.91□□□□□ -1.62
SMC4-219ENST00000487747 BTBD1Q9H0C5 482 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 SLCO5A1Q9H2Y9 848 aa4.91□□□□□ -1.62
SMC4-219ENST00000487747 KIR2DS5A0A0G2JLQ3 304 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 PRSS44E7EML9 344 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 KIR2DS3K7RE56 304 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 S100BP04271 92 aaPredicted RBP4.9□□□□□ -1.63
SMC4-219ENST00000487747 CHRNB1P11230 501 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 MST1P26927 711 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 PIK3CBP42338 1070 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 ZXDBP98169 803 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 SEMA3BQ13214 749 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 DAG1Q14118 895 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 PIK3CD-AS1Q5SR53 167 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 RAP1GAP2Q684P5 730 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 ACSM6Q6P461 480 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 DHRS13Q6UX07 377 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 KIAA0408Q6ZU52 694 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 UEVLDQ8IX04 471 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 TIFAQ96CG3 184 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 ZNF845Q96IR2 970 aaPredicted RBP4.9□□□□□ -1.63
SMC4-219ENST00000487747 MYLK2Q9H1R3 596 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 ZBTB26Q9HCK0 441 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 OBP2AQ9NY56 170 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 ANAPC4Q9UJX5 808 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 UTS2RQ9UKP6 389 aa4.9□□□□□ -1.63
SMC4-219ENST00000487747 G3BP2Q9UN86 482 aaKnown RBP4.9□□□□□ -1.63
SMC4-219ENST00000487747 TTC34A8MYJ7 566 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 ZC3H11AO75152 810 aaKnown RBP eCLIP4.89□□□□□ -1.634e-12■■■■■ 110
SMC4-219ENST00000487747 USP12O75317 370 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 WNT1P04628 370 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 FAXCQ5TGI0 409 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 ZNF474Q6S9Z5 364 aaPredicted RBP4.89□□□□□ -1.63
SMC4-219ENST00000487747 PIK3AP1Q6ZUJ8 805 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 CCDC28AQ8IWP9 274 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 CLASRPQ8N2M8 674 aaKnown RBP4.89□□□□□ -1.63
SMC4-219ENST00000487747 ATP11CQ8NB49 1132 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 ASB12Q8WXK4 309 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 ELOVL1Q9BW60 279 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 CDCP1Q9H5V8 836 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 SPATA31A5Q5VU36 1347 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 SPATA31A7Q8IWB4 1347 aa4.89□□□□□ -1.63
SMC4-219ENST00000487747 TNFRSF13BO14836 293 aaPredicted RBP4.88□□□□□ -1.63
SMC4-219ENST00000487747 AREL1O15033 823 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 ZSCAN9O15535 394 aaPredicted RBP4.88□□□□□ -1.63
SMC4-219ENST00000487747 PRPF4O43172 522 aaKnown RBP eCLIP4.88□□□□□ -1.63
SMC4-219ENST00000487747 THAP12O43422 761 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 KCNQ3O43525 872 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 CCNT2O60583 730 aaKnown RBP4.88□□□□□ -1.63
SMC4-219ENST00000487747 COQ9O75208 318 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 ENO1P06733 434 aaKnown RBP4.88□□□□□ -1.63
SMC4-219ENST00000487747 SLC3A2P08195 630 aaKnown RBP4.88□□□□□ -1.63
SMC4-219ENST00000487747 RFPL3SP0C7P2 107 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 RPL17P18621 184 aaKnown RBP4.88□□□□□ -1.63
SMC4-219ENST00000487747 MATN1P21941 496 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 ZNF543Q08ER8 600 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 LIPMQ5VYY2 423 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 C16orf89Q6UX73 402 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 ADHFE1Q8IWW8 467 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 LAS2Q8IYD9 372 aa4.88□□□□□ -1.63
SMC4-219ENST00000487747 DCP1BQ8IZD4 617 aaKnown RBP4.88□□□□□ -1.63
SMC4-219ENST00000487747 RNF152Q8N8N0 203 aa4.88□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms