RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 L1TD1Q5T7N2 865 aaKnown RBP4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 PRAMEF17Q5VTA0 474 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 CEP85Q6P2H3 762 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 DPY19L3Q6ZPD9 716 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 GALNT15Q8N3T1 639 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 NKAPQ8N5F7 415 aaKnown RBP4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 DDX51Q8N8A6 666 aaKnown RBP eCLIP4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 PNPLA1Q8N8W4 532 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 FAM71DQ8N9W8 422 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 MYRIPQ8NFW9 859 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 CPT1BQ92523 772 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 HMCESQ96FZ2 354 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 PRR25Q96S07 402 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 FAM167BQ9BTA0 163 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 TMEM120AQ9BXJ8 343 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 MAGEH1Q9H213 219 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 VPS16Q9H269 839 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 EPS8L2Q9H6S3 715 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 TMLHEQ9NVH6 421 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 DKK3Q9UBP4 350 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 MAFFQ9ULX9 164 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 LRP12Q9Y561 859 aa4.3□□□□□ -1.72
HMGB1P36-201ENST00000487709 CCDC187A0A096LP49 1063 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 TTC34A8MYJ7 566 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 UBE2Q2LH0YL09 131 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 LARGE1O95461 756 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 HSD3B1P14060 373 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 MATN1P21941 496 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 SFPQP23246 707 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 ARHGAP25P42331 645 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 NR4A2P43354 598 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 MCM2P49736 904 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 PLCD1P51178 756 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 SP2Q02086 613 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 CCDC15Q0P6D6 951 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 ACOX1Q15067 660 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 LCE1EQ5T753 118 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 NFRKBQ6P4R8 1299 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 CNGA4Q8IV77 575 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 SAMD14Q8IZD0 417 aaPredicted RBP4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 CLASRPQ8N2M8 674 aaKnown RBP4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 STYXQ8WUJ0 223 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 DAZAP1Q96EP5 407 aaKnown RBP4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 FYTTD1Q96QD9 318 aaKnown RBP4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 WDR24Q96S15 920 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 FSD1LQ9BXM9 530 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 IGSF9Q9P2J2 1179 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 BAG5Q9UL15 447 aa4.29□□□□□ -1.72
HMGB1P36-201ENST00000487709 H0YIZ8 118 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 PCDH17O14917 1159 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 GCATO75600 419 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 TNFRSF6BO95407 300 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 ANXA6P08133 673 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 PAPOLAP51003 745 aaKnown RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 GALNT1Q10472 559 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 PPFIA1Q13136 1202 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 TAF12Q16514 161 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 TIGD6Q17RP2 521 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 TBRG1Q3YBR2 411 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 CERKLQ49MI3 558 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 CCDC144NLQ6NUI1 221 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 VSTM1Q6UX27 236 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 SERPINA13PQ6UXR4 307 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 C16orf71Q8IYS4 520 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 HMGB4Q8WW32 186 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 C3orf49Q96BT1 292 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 REPS1Q96D71 796 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 ZSCAN31Q96LW9 406 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 CHMP4AQ9BY43 222 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 EBF3Q9H4W6 596 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 ELAC1Q9H777 363 aaKnown RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 USP29Q9HBJ7 922 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 RXFP3Q9NSD7 469 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 LIN7CQ9NUP9 197 aaKnown RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 TUBA8Q9NY65 449 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 DLL3Q9NYJ7 618 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 NDUFAF4Q9P032 175 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 C19orf53Q9UNZ5 99 aaPredicted RBP4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 PCDHB7Q9Y5E2 793 aa4.28□□□□□ -1.72
HMGB1P36-201ENST00000487709 AGPSO00116 658 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 DNPH1O43598 174 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 RNF8O76064 485 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 JTBO76095 146 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 FGAP02671 866 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 TUBB4AP04350 444 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 DHRS4L1P0CG22 281 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 HTR7P34969 479 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 ARL4CP56559 192 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 CYP1B1Q16678 543 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 GLE1Q53GS7 698 aaKnown RBP4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 TANGO2Q6ICL3 276 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 SULT6B1Q6IMI4 303 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 TMEM65Q6PI78 240 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 KIRREL2Q6UWL6 708 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 TRIM72Q6ZMU5 477 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 TRABD2AQ86V40 505 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 ZDHHC17Q8IUH5 632 aa4.27□□□□□ -1.73
HMGB1P36-201ENST00000487709 SLC44A2Q8IWA5 706 aaPredicted RBP4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms