RNA–Protein interactions for RNA: ENST00000487572.5

SEC22A-208, Transcript of SEC22 homolog A, vesicle trafficking protein, humanhuman

TSL 3

Gene SEC22A, Length 870 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC22A-208ENST00000487572 MAPK8IP2Q13387 824 aaPredicted RBP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 CDO1Q16878 200 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 C15orf59Q2T9L4 293 aaPredicted RBP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 GAB4Q2WGN9 574 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 ALKBH5Q6P6C2 394 aaKnown RBP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 SND1Q7KZF4 910 aaKnown RBP eCLIP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 ARCQ7LC44 396 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 SUGP1Q8IWZ8 645 aaKnown RBP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 FBXL6Q8N531 539 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 NAT16Q8N8M0 369 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 NT5C3BQ969T7 300 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 TRIM11Q96F44 468 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 NHEJ1Q9H9Q4 299 aaPredicted RBP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 PARVAQ9NVD7 372 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 PLK2Q9NYY3 685 aa20.33■□□□□ 0.85
SEC22A-208ENST00000487572 XPO7Q9UIA9 1087 aaKnown RBP20.33■□□□□ 0.85
SEC22A-208ENST00000487572 SSU72P8A0A1W2PR75 194 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 FAM170BA6NMN3 283 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 LATS1O95835 1130 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 SLC2A3P11169 496 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 GPD1P21695 349 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 TARSP26639 723 aaKnown RBP20.32■□□□□ 0.84
SEC22A-208ENST00000487572 ATXN1P54253 815 aaKnown RBP20.32■□□□□ 0.84
SEC22A-208ENST00000487572 RPL7AP62424 266 aaKnown RBP20.32■□□□□ 0.84
SEC22A-208ENST00000487572 MAMLD1Q13495 774 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 EIF4EBP2Q13542 120 aaPredicted RBP20.32■□□□□ 0.84
SEC22A-208ENST00000487572 CCDC14Q49A88 953 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 ADGRF1Q5T601 910 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 ASTLQ6HA08 431 aaPredicted RBP20.32■□□□□ 0.84
SEC22A-208ENST00000487572 NADSYN1Q6IA69 706 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 RFWD3Q6PCD5 774 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 C1orf228Q6PIY5 440 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 BMP8AQ7Z5Y6 402 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 C12orf40Q86WS4 652 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 PJA1Q8NG27 643 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 CCDC42Q96M95 316 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 P2RY13Q9BPV8 354 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 SIT1Q9Y3P8 196 aa20.32■□□□□ 0.84
SEC22A-208ENST00000487572 HOXC11O43248 304 aaPredicted RBP20.31■□□□□ 0.84
SEC22A-208ENST00000487572 PI15O43692 258 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 CYBBP04839 570 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 MYBL1P10243 752 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 TYRP14679 529 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 SLC6A4P31645 630 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 OPRD1P41143 372 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 SLC6A11P48066 632 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 GALK1P51570 392 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 KDSRQ06136 332 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 SLC18A3Q16572 532 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 ASTE1Q2TB18 679 aaPredicted RBP20.31■□□□□ 0.84
SEC22A-208ENST00000487572 RAB6CQ53S08 254 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 PPP1R15BQ5SWA1 713 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 SH3PXD2AQ5TCZ1 1133 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 PLEKHA7Q6IQ23 1121 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 FAM217AQ8IXS0 508 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 CPXM2Q8N436 756 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 ATP6V0D2Q8N8Y2 350 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 DDI1Q8WTU0 396 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 CD101Q93033 1021 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 BTN2A3PQ96KV6 586 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 LRFN3Q9BTN0 628 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 RAB6CQ9H0N0 254 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 THAP2Q9H0W7 228 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 SPTLC3Q9NUV7 552 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 SLC12A6Q9UHW9 1150 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 STOML2Q9UJZ1 356 aa20.31■□□□□ 0.84
SEC22A-208ENST00000487572 GOLGA6L3A6NEY3 463 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 KCNU1A8MYU2 1149 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 F9P00740 461 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 DCNP07585 359 aaKnown RBP20.3■□□□□ 0.84
SEC22A-208ENST00000487572 AOC1P19801 751 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 RDXP35241 583 aaKnown RBP20.3■□□□□ 0.84
SEC22A-208ENST00000487572 PTPN9P43378 593 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 CXCR3P49682 368 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 PPP2R5DQ14738 602 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 FAM133BQ5BKY9 247 aaKnown RBP20.3■□□□□ 0.84
SEC22A-208ENST00000487572 RAP1GAP2Q684P5 730 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 CHSY1Q86X52 802 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 CCDC105Q8IYK2 499 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 AZIN2Q96A70 460 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 PGAP3Q96FM1 320 aaPredicted RBP20.3■□□□□ 0.84
SEC22A-208ENST00000487572 P2RY11Q96G91 374 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 NELL2Q99435 816 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 DDX50Q9BQ39 737 aaKnown RBP20.3■□□□□ 0.84
SEC22A-208ENST00000487572 WDCPQ9H6R7 721 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 FBRSL1Q9HCM7 1045 aaKnown RBP20.3■□□□□ 0.84
SEC22A-208ENST00000487572 MARK1Q9P0L2 795 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 NENFQ9UMX5 172 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 SCINQ9Y6U3 715 aa20.3■□□□□ 0.84
SEC22A-208ENST00000487572 CCP110O43303 1012 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 SGSHP51688 502 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 CLCN5P51795 746 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 GALCP54803 685 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 GRSF1Q12849 480 aaKnown RBP eCLIP20.29■□□□□ 0.84
SEC22A-208ENST00000487572 MPPE1Q53F39 396 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 TMEM196Q5HYL7 178 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 FYB2Q5VWT5 728 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 FSTL4Q6MZW2 842 aa20.29■□□□□ 0.84
SEC22A-208ENST00000487572 ARHGAP30Q7Z6I6 1101 aaPredicted RBP20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms