RNA–Protein interactions for RNA: ENST00000487461.1

VPS16-208, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 634 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-208ENST00000487461 RGS7P49802 495 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 ZNF132P52740 706 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 COPAP53621 1224 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 ATXN3P54252 364 aaPredicted RBP12.74□□□□□ -0.37
VPS16-208ENST00000487461 CNGA2Q16280 664 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 MPPE1Q53F39 396 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 PMF1Q6P1K2 205 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 TMEM270Q6UE05 265 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 TMPRSS6Q8IU80 811 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 RGL4Q8IZJ4 473 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 SIX6OS1Q8N1H7 587 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 HDDC3Q8N4P3 179 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 LMO3Q8TAP4 145 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 RNF139Q8WU17 664 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 SLC35F5Q8WV83 523 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 KAT5Q92993 513 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 GTPBP4Q9BZE4 634 aaKnown RBP12.74□□□□□ -0.37
VPS16-208ENST00000487461 CIPCQ9C0C6 399 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 SLC32A1Q9H598 525 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 METTL14Q9HCE5 456 aaKnown RBP12.74□□□□□ -0.37
VPS16-208ENST00000487461 ABCC13Q9NSE7 274 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 WSB2Q9NYS7 404 aaPredicted RBP12.74□□□□□ -0.37
VPS16-208ENST00000487461 USP36Q9P275 1121 aaKnown RBP12.74□□□□□ -0.37
VPS16-208ENST00000487461 STOML2Q9UJZ1 356 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 MAN1B1Q9UKM7 699 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 PCDHB4Q9Y5E5 795 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 CEP192Q8TEP8 1941 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 CEP295Q9C0D2 2601 aa12.74□□□□□ -0.37
VPS16-208ENST00000487461 SPAARA0A1B0GVQ0 90 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 C1QTNF9BB2RNN3 333 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 PPP1R3GB7ZBB8 358 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 PIK3R2O00459 728 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 PSMA7O14818 248 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 PMM2O15305 246 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 MSI1O43347 362 aaKnown RBP12.73□□□□□ -0.37
VPS16-208ENST00000487461 SYNCRIPO60506 623 aaKnown RBP12.73□□□□□ -0.37
VPS16-208ENST00000487461 OPHN1O60890 802 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 PROS1P07225 676 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 PAEPP09466 180 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 C1QTNF9P0C862 333 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 SETSIPP0DME0 302 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 NCAM1P13591 858 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 CD59P13987 128 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 BMP6P22004 513 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 HLA-FP30511 346 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 DAOAP59103 153 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 NUCB2P80303 420 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 EIF4HQ15056 248 aaKnown RBP12.73□□□□□ -0.37
VPS16-208ENST00000487461 PLEKHG6Q3KR16 790 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 SYCP2LQ5T4T6 812 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 ADGRF1Q5T601 910 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 RABEPKQ7Z6M1 372 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 SCML4Q8N228 414 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 MINDY1Q8N5J2 469 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 FOXJ1Q92949 421 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 TMA16Q96EY4 203 aaKnown RBP12.73□□□□□ -0.37
VPS16-208ENST00000487461 SIPA1Q96FS4 1042 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 CEP63Q96MT8 703 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 NT5C1BQ96P26 610 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 GPR174Q9BXC1 333 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 CNGB3Q9NQW8 809 aa12.73□□□□□ -0.37
VPS16-208ENST00000487461 HOOK1Q9UJC3 728 aaKnown RBP12.73□□□□□ -0.37
VPS16-208ENST00000487461 GOLGA6L7A0A1B0GV03 622 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 EPHX1P07099 455 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 SYPP08247 313 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 HLA-EP13747 358 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 BRD2P25440 801 aaKnown RBP12.72□□□□□ -0.37
VPS16-208ENST00000487461 OXTRP30559 389 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 TPMTP51580 245 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 SGSHP51688 502 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 FAM193AP78312 1265 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 STIM1Q13586 685 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 E2F5Q15329 346 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 WDR45BQ5MNZ6 344 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 KLHL10Q6JEL2 608 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 TTI2Q6NXR4 508 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 MSANTD2Q6P1R3 559 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 ADIPOR2Q86V24 386 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 ELOA2Q8IYF1 753 aaPredicted RBP12.72□□□□□ -0.37
VPS16-208ENST00000487461 PPM1KQ8N3J5 372 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 EHBP1Q8NDI1 1231 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 CYB5D2Q8WUJ1 264 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 DNASE2BQ8WZ79 361 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 PRCCQ92733 491 aaPredicted RBP12.72□□□□□ -0.37
VPS16-208ENST00000487461 SCNM1Q9BWG6 230 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 TMEM121BQ9BXQ6 578 aaPredicted RBP12.72□□□□□ -0.37
VPS16-208ENST00000487461 DNAAF2Q9NVR5 837 aaKnown RBP12.72□□□□□ -0.37
VPS16-208ENST00000487461 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.72□□□□□ -0.37
VPS16-208ENST00000487461 ADAMTS9Q9P2N4 1935 aa12.72□□□□□ -0.37
VPS16-208ENST00000487461 PCDH15Q96QU1 1955 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 METTL12A8MUP2 240 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 GJB3O75712 270 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 LATS1O95835 1130 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 IGLV3-19P01714 112 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 IGLV3-27P01718 113 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 GNSP15586 552 aa12.71□□□□□ -0.37
VPS16-208ENST00000487461 SIM1P81133 766 aaPredicted RBP12.71□□□□□ -0.37
VPS16-208ENST00000487461 ARID5AQ03989 594 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms