RNA–Protein interactions for RNA: ENST00000487244.5

UBE4B-209, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best)

Gene UBE4B, Length 818 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-209ENST00000487244 CD101Q93033 1021 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 CPXM1Q96SM3 734 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 ZDHHC4Q9NPG8 344 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 CNGB3Q9NQW8 809 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 ST7Q9NRC1 585 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 FAM207AQ9NSI2 230 aaPredicted RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 TBC1D14Q9P2M4 693 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 LIMA1Q9UHB6 759 aaKnown RBP7.49□□□□□ -1.21
UBE4B-209ENST00000487244 SIK3Q9Y2K2 1263 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 SPTBN4Q9H254 2564 aa7.49□□□□□ -1.21
UBE4B-209ENST00000487244 LGALS16A8MUM7 142 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 NEDD8-MDP1E9PL57 170 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 K7EQS6 105 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 K7ESF4 209 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 ERVH48-1M5A8F1 160 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 HOXC11O43248 304 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-209ENST00000487244 PAPSS1O43252 624 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-209ENST00000487244 MED7O43513 233 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 TULP3O75386 442 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 LTFP02788 710 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 ERBB2P04626 1255 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 NBL1P41271 181 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 ABL2P42684 1182 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 MRE11P49959 708 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 PITX1P78337 314 aaPredicted RBP7.48□□□□□ -1.21
UBE4B-209ENST00000487244 CBLBQ13191 982 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 SYCP1Q15431 976 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 TAF5Q15542 800 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 KLHL40Q2TBA0 621 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 ANO4Q32M45 955 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 TAF3Q5VWG9 929 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 MSANTD2Q6P1R3 559 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 TPGS1Q6ZTW0 290 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 ASCL5Q7RTU5 278 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 TADA2BQ86TJ2 420 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 NOP9Q86U38 636 aaKnown RBP7.48□□□□□ -1.21
UBE4B-209ENST00000487244 ALYREFQ86V81 257 aaKnown RBP7.48□□□□□ -1.21
UBE4B-209ENST00000487244 DENND1CQ8IV53 801 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 FMNL3Q8IVF7 1028 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 ETFBKMTQ8IXQ9 262 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 LINC00528Q8N1L1 170 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 SCML4Q8N228 414 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 SPEM1Q8N4L4 309 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 KIAA1958Q8N8K9 716 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 RPLP0P6Q8NHW5 317 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 SLC20A1Q8WUM9 679 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 OTUB2Q96DC9 234 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 HSFY1Q96LI6 401 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 FAM81BQ96LP2 452 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 NLRC4Q9NPP4 1024 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 SPHK2Q9NRA0 654 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 TMPRSS4Q9NRS4 437 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 PLK2Q9NYY3 685 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 LSM7Q9UK45 103 aaKnown RBP7.48□□□□□ -1.21
UBE4B-209ENST00000487244 FBXO4Q9UKT5 387 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 AGO1Q9UL18 857 aaKnown RBP7.48□□□□□ -1.21
UBE4B-209ENST00000487244 NAALADL1Q9UQQ1 740 aa7.48□□□□□ -1.21
UBE4B-209ENST00000487244 MUC22E2RYF6 1773 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 PROB1E7EW31 1015 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CACNG3O60359 315 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 GFPT2O94808 682 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 FBXO21O94952 628 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 KAT7O95251 611 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 IGLV3-27P01718 113 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 TYRP14679 529 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 HNRNPLP14866 589 aaKnown RBP eCLIP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CYP11B1P15538 503 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 DRD1P21728 446 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CXCL12P48061 93 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 PXNP49023 591 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 ZNF165P49910 485 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CCR3P51677 355 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 SGSHP51688 502 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 JAM2P57087 298 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 POLR2FP61218 127 aaKnown RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 AMPD2Q01433 879 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 GAD2Q05329 585 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 GOLGA8FQ08AF8 430 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 GOLGA8DPQ0D2H9 430 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 SRSF5Q13243 272 aaKnown RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 IQCB1Q15051 598 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 TRIP4Q15650 581 aaPredicted RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 MEA1Q16626 185 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 PTPN20Q4JDL3 420 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 C2CD6Q53TS8 623 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 C2orf27AQ580R0 203 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 FKBP15Q5T1M5 1219 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 EMC10Q5UCC4 262 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 SYPL2Q5VXT5 272 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 HEATR6Q6AI08 1181 aaKnown RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 TOGARAM2Q6ZUX3 1019 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 TMEM110Q86TL2 294 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 TAC4Q86UU9 113 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 ABCA7Q8IZY2 2146 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 CCDC33Q8N5R6 958 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 DQX1Q8TE96 717 aaKnown RBP7.47□□□□□ -1.21
UBE4B-209ENST00000487244 STK32AQ8WU08 396 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 RNF139Q8WU17 664 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 IRGQQ8WZA9 623 aa7.47□□□□□ -1.21
UBE4B-209ENST00000487244 DDX1Q92499 740 aaKnown RBP7.47□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms