RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 TRIM59Q8IWR1 403 aa25.62■■□□□ 1.69
LIME1-206ENST00000487026 TRIML1Q8N9V2 468 aa25.62■■□□□ 1.69
LIME1-206ENST00000487026 UCMAQ8WVF2 138 aa25.62■■□□□ 1.69
LIME1-206ENST00000487026 SRRTQ9BXP5 876 aaKnown RBP25.62■■□□□ 1.69
LIME1-206ENST00000487026 PRDM16Q9HAZ2 1276 aa25.62■■□□□ 1.69
LIME1-206ENST00000487026 ANGPTL2Q9UKU9 493 aa25.62■■□□□ 1.69
LIME1-206ENST00000487026 PI4KAP42356 2102 aa25.61■■□□□ 1.69
LIME1-206ENST00000487026 P4HA2O15460 535 aa25.61■■□□□ 1.69
LIME1-206ENST00000487026 HOXD9P28356 352 aaPredicted RBP25.61■■□□□ 1.69
LIME1-206ENST00000487026 SCML4Q8N228 414 aa25.61■■□□□ 1.69
LIME1-206ENST00000487026 HSPA12BQ96MM6 686 aa25.61■■□□□ 1.69
LIME1-206ENST00000487026 KREMEN1Q96MU8 473 aa25.61■■□□□ 1.69
LIME1-206ENST00000487026 SLC2A11Q9BYW1 496 aa25.61■■□□□ 1.69
LIME1-206ENST00000487026 MKRN2Q9H000 416 aaKnown RBP25.61■■□□□ 1.69
LIME1-206ENST00000487026 NDUFS2O75306 463 aa25.6■■□□□ 1.69
LIME1-206ENST00000487026 DPP6P42658 865 aa25.6■■□□□ 1.69
LIME1-206ENST00000487026 PAK1Q13153 545 aa25.6■■□□□ 1.69
LIME1-206ENST00000487026 ENPP2Q13822 863 aa25.6■■□□□ 1.69
LIME1-206ENST00000487026 DUOXA1Q1HG43 343 aa25.6■■□□□ 1.69
LIME1-206ENST00000487026 TMA16Q96EY4 203 aaKnown RBP25.6■■□□□ 1.69
LIME1-206ENST00000487026 MIS12Q9H081 205 aa25.6■■□□□ 1.69
LIME1-206ENST00000487026 SLC6A14Q9UN76 642 aa25.6■■□□□ 1.69
LIME1-206ENST00000487026 GOLGA6L7A0A1B0GV03 622 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 SYNCRIPO60506 623 aaKnown RBP25.59■■□□□ 1.69
LIME1-206ENST00000487026 AFPP02771 609 aaKnown RBP25.59■■□□□ 1.69
LIME1-206ENST00000487026 PRKCHP24723 683 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 SGSHP51688 502 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 ZNF132P52740 706 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 GCNT1Q02742 428 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 ADGRF1Q5T601 910 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 FOXR2Q6PJQ5 311 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 CEP76Q8TAP6 659 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 GTPBP2Q9BX10 602 aaKnown RBP25.59■■□□□ 1.69
LIME1-206ENST00000487026 INTS2Q9H0H0 1204 aaKnown RBP25.59■■□□□ 1.69
LIME1-206ENST00000487026 STOML2Q9UJZ1 356 aa25.59■■□□□ 1.69
LIME1-206ENST00000487026 UTP18Q9Y5J1 556 aaKnown RBP eCLIP25.59■■□□□ 1.69
LIME1-206ENST00000487026 NPC1O15118 1278 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 GNA14O95837 355 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 LTFP02788 710 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 SERPINF2P08697 491 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 MAOBP27338 520 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 HLA-FP30511 346 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 HOXD12P35452 270 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 GFPT1Q06210 699 aaPredicted RBP25.58■■□□□ 1.69
LIME1-206ENST00000487026 STILQ15468 1287 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 MSANTD2Q6P1R3 559 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 RFWD3Q6PCD5 774 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 CACUL1Q86Y37 369 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 TMPRSS6Q8IU80 811 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 RGL4Q8IZJ4 473 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 DEFB124Q8NES8 71 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 IRGQQ8WZA9 623 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 ZNF419Q96HQ0 510 aaPredicted RBP25.58■■□□□ 1.69
LIME1-206ENST00000487026 HSFY1Q96LI6 401 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 ITM2CQ9NQX7 267 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 ADAMTS9Q9P2N4 1935 aa25.58■■□□□ 1.69
LIME1-206ENST00000487026 ASCC3Q8N3C0 2202 aaKnown RBP25.57■■□□□ 1.68
LIME1-206ENST00000487026 MAP1BP46821 2468 aaKnown RBP25.57■■□□□ 1.68
LIME1-206ENST00000487026 KCNJ18B7U540 433 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 EPHX1P07099 455 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 KRT5P13647 590 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 HLA-EP13747 358 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 CD6P30203 668 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 ARID5AQ03989 594 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 ZNF252P-AS1Q0IIN9 211 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 EIF4HQ15056 248 aaKnown RBP25.57■■□□□ 1.68
LIME1-206ENST00000487026 SCUBE3Q8IX30 993 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 OR2I1PQ8NGU4 316 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 CYB5D2Q8WUJ1 264 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 TOE1Q96GM8 510 aaKnown RBP25.57■■□□□ 1.68
LIME1-206ENST00000487026 CAPN10Q9HC96 672 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 UBE2TQ9NPD8 197 aaPredicted RBP25.57■■□□□ 1.68
LIME1-206ENST00000487026 ABCB8Q9NUT2 735 aa25.57■■□□□ 1.68
LIME1-206ENST00000487026 CACNA1BQ00975 2339 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 TIMM44O43615 452 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 NCAM1P13591 858 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 CEACAM1P13688 526 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 CSRP1P21291 193 aaKnown RBP25.56■■□□□ 1.68
LIME1-206ENST00000487026 COPAP53621 1224 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 ATXN3P54252 364 aaPredicted RBP25.56■■□□□ 1.68
LIME1-206ENST00000487026 MARSP56192 900 aaKnown RBP25.56■■□□□ 1.68
LIME1-206ENST00000487026 TBX4P57082 545 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 CAMK4Q16566 473 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 DENND1BQ6P3S1 775 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 SERPINA13PQ6UXR4 307 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 METTL3Q86U44 580 aaKnown RBP25.56■■□□□ 1.68
LIME1-206ENST00000487026 CREBRFQ8IUR6 639 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 ZNF366Q8N895 744 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 GOLGA1Q92805 767 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 SIPA1Q96FS4 1042 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 ST7Q9NRC1 585 aa25.56■■□□□ 1.68
LIME1-206ENST00000487026 WSB2Q9NYS7 404 aaPredicted RBP25.56■■□□□ 1.68
LIME1-206ENST00000487026 USP36Q9P275 1121 aaKnown RBP25.56■■□□□ 1.68
LIME1-206ENST00000487026 KRT37O76014 449 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 LATS1O95835 1130 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 IGLV3-27P01718 113 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 FYNP06241 537 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 SLC6A4P31645 630 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 GPD2P43304 727 aa25.55■■□□□ 1.68
LIME1-206ENST00000487026 TPMTP51580 245 aa25.55■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms