RNA–Protein interactions for RNA: ENST00000486532.5

R3HDM1-217, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-217ENST00000486532 SLC3A2P08195 630 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PDHA1P08559 390 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 HNRNPCL4P0DMR1 293 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 TOP1P11387 765 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 SCG2P13521 617 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 HSPA6P17066 643 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CAPN2P17655 700 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 HDCP19113 662 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 HLA-DPA1P20036 260 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PRKAR1BP31321 381 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 NF2P35240 595 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 GRIA3P42263 894 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 MSH2P43246 934 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 ABCG1P45844 678 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 SULT1E1P49888 294 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PEX5P50542 639 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CTXN1P60606 82 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 POLR2FP61218 127 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 TNFAIP2Q03169 654 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 FPGSQ05932 587 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 RUNX1T1Q06455 604 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PDIA5Q14554 519 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PTPRRQ15256 657 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 ASIC2Q16515 512 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 PROSER3Q2NL68 480 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 KBTBD12Q3ZCT8 623 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 SUPT20HL1Q3ZLR7 823 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CEP55Q53EZ4 464 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 TMEM240Q5SV17 173 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 ALKBH5Q6P6C2 394 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 ZNF788Q6ZQV5 615 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 IKBIPQ70UQ0 350 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 GALNT7Q86SF2 657 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 MYCT1Q8N699 235 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 DEPTORQ8TB45 409 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 HASPINQ8TF76 798 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CDKL2Q92772 493 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 SARAFQ96BY9 339 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 GIMAP5Q96F15 307 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 FBXL20Q96IG2 436 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 COG3Q96JB2 828 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CNDP1Q96KN2 507 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 SGCZQ96LD1 299 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 UBXN10Q96LJ8 280 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 EYA3Q99504 573 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 NUP88Q99567 741 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 WDR12Q9GZL7 423 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 VCPKMTQ9H867 229 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 UPF2Q9HAU5 1272 aaKnown RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CPNE5Q9HCH3 593 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 DMRT3Q9NQL9 472 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 ASB6Q9NWX5 421 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 UBAP1Q9NZ09 502 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 CHMP5Q9NZZ3 219 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 DNM3Q9UQ16 869 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 TMED5Q9Y3A6 229 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 JRKLQ9Y4A0 524 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 ZFP37Q9Y6Q3 630 aaPredicted RBP4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 NISCHQ9Y2I1 1504 aa4.49□□□□□ -1.69
R3HDM1-217ENST00000486532 MYBBP1AQ9BQG0 1328 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CDHR4A6H8M9 788 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 DNAJC9-AS1A6NH13 148 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 LRRC14BA6NHZ5 514 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CACNB4O00305 520 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CTNND1O60716 968 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 RTN2O75298 545 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 PRSS23O95084 383 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 STARD3NLO95772 234 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 TPM1P09493 284 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 DLATP10515 647 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 PF4V1P10720 104 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 ALOX12P18054 663 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 FPR1P21462 350 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 MAPK3P27361 379 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 PCSK1P29120 753 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CTGFP29279 349 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CSTF2P33240 577 aaKnown RBP eCLIP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 MCM5P33992 734 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 HSD17B2P37059 387 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 HADHAP40939 763 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 RECQLP46063 649 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 IFNAR2P48551 515 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 ALDH3A2P51648 485 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CLCN2P51788 898 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 SLC12A2P55011 1212 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 NOMO3P69849 1222 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 TMPRSS15P98073 1019 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 SRSF2Q01130 221 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 IL1RL1Q01638 556 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 PIGFQ07326 219 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 AP1B1Q10567 949 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 STAT4Q14765 748 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 STK11Q15831 433 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 MEA1Q16626 185 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CLPPQ16740 277 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 SHROOM1Q2M3G4 852 aaPredicted RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 TUBB8Q3ZCM7 444 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 NOMO2Q5JPE7 1267 aa4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 GPATCH4Q5T3I0 446 aaKnown RBP4.48□□□□□ -1.69
R3HDM1-217ENST00000486532 CCDC183Q5T5S1 534 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms