RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 GLB1LQ6UWU2 654 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 HTR3CQ8WXA8 447 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 SGSM3Q96HU1 749 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 PAFAH2Q99487 392 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 RHOBTB2Q9BYZ6 727 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 TRABDQ9H4I3 376 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 TMPRSS4Q9NRS4 437 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 MFHAS1Q9Y4C4 1052 aa21.05■□□□□ 0.96
HPS3-206ENST00000486530 BRCA2P51587 3418 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 FAM47DPA6NHR8 397 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 PRPF4O43172 522 aaKnown RBP eCLIP21.04■□□□□ 0.96
HPS3-206ENST00000486530 CREB3O43889 395 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 ZNF189O75820 626 aaPredicted RBP21.04■□□□□ 0.96
HPS3-206ENST00000486530 KIAA0754O94854 1291 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 BDNFP23560 247 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 SLC18A1P54219 525 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 MTM1Q13496 603 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 MPP2Q14168 576 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 PAFAH1B3Q15102 231 aaKnown RBP21.04■□□□□ 0.96
HPS3-206ENST00000486530 PKN2Q16513 984 aaKnown RBP21.04■□□□□ 0.96
HPS3-206ENST00000486530 PM20D1Q6GTS8 502 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 ADGRD1Q6QNK2 874 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 RFX8Q6ZV50 586 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 YTHDF3Q7Z739 585 aaKnown RBP21.04■□□□□ 0.96
HPS3-206ENST00000486530 OR10T2Q8NGX3 314 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 LRRN4Q8WUT4 740 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 LRRC39Q96DD0 335 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 SMC6Q96SB8 1091 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 CYTH2Q99418 400 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 FERMT1Q9BQL6 677 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 TRIM62Q9BVG3 475 aa21.04■□□□□ 0.96
HPS3-206ENST00000486530 SMG5Q9UPR3 1016 aaKnown RBP21.04■□□□□ 0.96
HPS3-206ENST00000486530 A0A0A0MRY4 1105 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 KBTBD13C9JR72 458 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 VAV1P15498 845 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 EFTUD2Q15029 972 aaKnown RBP eCLIP21.03■□□□□ 0.96
HPS3-206ENST00000486530 PDK1Q15118 436 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 PRKD1Q15139 912 aaPredicted RBP21.03■□□□□ 0.96
HPS3-206ENST00000486530 ARL13BQ3SXY8 428 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 SYCP2LQ5T4T6 812 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 SLC24A5Q71RS6 500 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 RTN4RL1Q86UN2 441 aaPredicted RBP21.03■□□□□ 0.96
HPS3-206ENST00000486530 TAX1BP1Q86VP1 789 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 IGDCC3Q8IVU1 814 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 LRRC34Q8IZ02 419 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 CKAP2Q8WWK9 683 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 SPATA13Q96N96 652 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 DDIT4Q9NX09 232 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 FBXW11Q9UKB1 542 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 PCDHB8Q9UN66 801 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 MYO1CO00159 1063 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 PPP1R12AO14974 1030 aaPredicted RBP21.03■□□□□ 0.96
HPS3-206ENST00000486530 DCLK1O15075 740 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 STK10O94804 968 aaKnown RBP21.03■□□□□ 0.96
HPS3-206ENST00000486530 METTL18O95568 372 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 ITGB1P05556 798 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 VIMP08670 466 aaKnown RBP21.03■□□□□ 0.96
HPS3-206ENST00000486530 STX2P32856 288 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 FDFT1P37268 417 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 MSH2P43246 934 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 ZNF135P52742 658 aaPredicted RBP21.03■□□□□ 0.96
HPS3-206ENST00000486530 SEMA3BQ13214 749 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 SEMA5AQ13591 1074 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 CAND1Q86VP6 1230 aaKnown RBP21.03■□□□□ 0.96
HPS3-206ENST00000486530 ADAM32Q8TC27 787 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 TMLHEQ9NVH6 421 aa21.03■□□□□ 0.96
HPS3-206ENST00000486530 HCAR3P49019 387 aa21.02■□□□□ 0.96
HPS3-206ENST00000486530 GLUD2P49448 558 aa21.02■□□□□ 0.96
HPS3-206ENST00000486530 YWHAGP61981 247 aaKnown RBP eCLIP21.02■□□□□ 0.96
HPS3-206ENST00000486530 C6orf89Q6UWU4 347 aa21.02■□□□□ 0.96
HPS3-206ENST00000486530 PDZD4Q76G19 769 aaPredicted RBP21.02■□□□□ 0.96
HPS3-206ENST00000486530 CCDC33Q8N5R6 958 aa21.02■□□□□ 0.96
HPS3-206ENST00000486530 URGCPQ8TCY9 931 aa21.02■□□□□ 0.96
HPS3-206ENST00000486530 MRRFQ96E11 262 aaKnown RBP21.02■□□□□ 0.96
HPS3-206ENST00000486530 SSU72Q9NP77 194 aaKnown RBP21.02■□□□□ 0.96
HPS3-206ENST00000486530 PAK6Q9NQU5 681 aaPredicted RBP21.02■□□□□ 0.96
HPS3-206ENST00000486530 WBP1LQ9NX94 342 aa21.02■□□□□ 0.96
HPS3-206ENST00000486530 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.02■□□□□ 0.96
HPS3-206ENST00000486530 RAD54BQ9Y620 910 aa21.02■□□□□ 0.96
HPS3-206ENST00000486530 TCRBV9S1A1TA0A576 114 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 DNM1LO00429 736 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 AVILO75366 819 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 MAGEA3P43357 314 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 DSC1Q08554 894 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 ANKRD20A2Q5SQ80 823 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 ANKRD20A1Q5TYW2 823 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 ANKRD20A3Q5VUR7 823 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 C4orf50Q6ZRC1 276 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 BEND5Q7L4P6 421 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 CTU1Q7Z7A3 348 aaKnown RBP21.01■□□□□ 0.95
HPS3-206ENST00000486530 DCAKDQ8WVC6 231 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 CABS1Q96KC9 395 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 TMEM209Q96SK2 561 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 LGMNQ99538 433 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 COLEC11Q9BWP8 271 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 XAB2Q9HCS7 855 aaKnown RBP21.01■□□□□ 0.95
HPS3-206ENST00000486530 SAMD15Q9P1V8 674 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 MYO16Q9Y6X6 1858 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 TMEM189-UBE2V1I3L0A0 370 aa21.01■□□□□ 0.95
HPS3-206ENST00000486530 OPHN1O60890 802 aa21.01■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms