RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 BEND5Q7L4P6 421 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 TADA2BQ86TJ2 420 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 MIB1Q86YT6 1006 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 TTC16Q8NEE8 873 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 NOX5Q96PH1 765 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 NUP58Q9BVL2 599 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 PDCL3Q9H2J4 239 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 LINC00597Q9H2U6 94 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 EBF3Q9H4W6 596 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 OLA1Q9NTK5 396 aaKnown RBP13.48□□□□□ -0.25
SSR4-211ENST00000486204 DUS2Q9NX74 493 aaKnown RBP13.48□□□□□ -0.25
SSR4-211ENST00000486204 MARCH2Q9P0N8 246 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 PCDHGA5Q9Y5G8 931 aa13.48□□□□□ -0.25
SSR4-211ENST00000486204 CBFA2T2O43439 604 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 KLKB1P03952 638 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 IRF1P10914 325 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 SOX9P48436 509 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 MLLT6P55198 1093 aaPredicted RBP13.47□□□□□ -0.25
SSR4-211ENST00000486204 CENPCQ03188 943 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 PTP4A2Q12974 167 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 RUNX3Q13761 415 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 GAB4Q2WGN9 574 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 ITPRIPL2Q3MIP1 535 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 C2CD6Q53TS8 623 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 DGKKQ5KSL6 1271 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 DAB2IPQ5VWQ8 1189 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 SYPL2Q5VXT5 272 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 TCEAL6Q6IPX3 200 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 CC2D1AQ6P1N0 951 aaPredicted RBP13.47□□□□□ -0.25
SSR4-211ENST00000486204 C1orf228Q6PIY5 440 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 TRIM72Q6ZMU5 477 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 Q6ZNB5 142 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 HTR3DQ70Z44 454 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 RSRC2Q7L4I2 434 aaKnown RBP13.47□□□□□ -0.25
SSR4-211ENST00000486204 XYLT1Q86Y38 959 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 BBS7Q8IWZ6 715 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 IPO4Q8TEX9 1081 aaKnown RBP13.47□□□□□ -0.25
SSR4-211ENST00000486204 CPA5Q8WXQ8 436 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 TCEAL3Q969E4 200 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 IQCDQ96DY2 449 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 MSANTD3Q96H12 275 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 SLC2A13Q96QE2 648 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 AGPAT1Q99943 283 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 EDEM2Q9BV94 578 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 ASNSD1Q9NWL6 643 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 SFMBT1Q9UHJ3 866 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 NAALADL1Q9UQQ1 740 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 EML5Q05BV3 1969 aa13.47□□□□□ -0.25
SSR4-211ENST00000486204 MSI1O43347 362 aaKnown RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 IGLV3-25P01717 112 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 IGLV3-27P01718 113 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 CYP17A1P05093 508 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 TPM3P06753 285 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 GLI1P08151 1106 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 CEACAM1P13688 526 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 MMP8P22894 467 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 CTHP32929 405 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 IFNAR2P48551 515 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 YWHAZP63104 245 aaKnown RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 PITX1P78337 314 aaPredicted RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 ZBED6P86452 979 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 TRIP4Q15650 581 aaPredicted RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 ASIC2Q16515 512 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 CLEC16AQ2KHT3 1053 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 SFMBT2Q5VUG0 894 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 HGSNATQ68CP4 663 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 SPECC1LQ69YQ0 1117 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 TXNDC11Q6PKC3 985 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 SLC26A9Q7LBE3 791 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 ZNF571Q7Z3V5 609 aaPredicted RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 ERICH1Q86X53 443 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 FMNL3Q8IVF7 1028 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 ZNF397Q8NF99 534 aaPredicted RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 TTC8Q8TAM2 541 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 CSGALNACT1Q8TDX6 532 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 DQX1Q8TE96 717 aaKnown RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 RNF139Q8WU17 664 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 ATP2A3Q93084 1043 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 FAM149B1Q96BN6 582 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 C18orf8Q96DM3 657 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 ECT2Q9H8V3 914 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 POPDC2Q9HBU9 364 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 SH3BP1Q9Y3L3 701 aa13.46□□□□□ -0.25
SSR4-211ENST00000486204 HBS1LQ9Y450 684 aaKnown RBP13.46□□□□□ -0.25
SSR4-211ENST00000486204 MUC22E2RYF6 1773 aaPredicted RBP13.45□□□□□ -0.26
SSR4-211ENST00000486204 CHD5Q8TDI0 1954 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 SLC12A8A0AV02 714 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 SPECC1L-ADORA2AF8WAN1 911 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 SLC9A3R1O14745 358 aaPredicted RBP13.45□□□□□ -0.26
SSR4-211ENST00000486204 HSF2BPO75031 334 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 DAB1O75553 588 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 CCDC172P0C7W6 258 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 NCAM1P13591 858 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 CASP14P31944 242 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 GJA4P35212 333 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 SCNN1AP37088 669 aa13.45□□□□□ -0.26
SSR4-211ENST00000486204 PXNP49023 591 aaPredicted RBP13.45□□□□□ -0.26
SSR4-211ENST00000486204 KPNA1P52294 538 aaPredicted RBP13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms