RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 FAM71AQ8IYT1 594 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 SIX6OS1Q8N1H7 587 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 DCLK2Q8N568 766 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 WDTC1Q8N5D0 677 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 ZNF513Q8N8E2 541 aaPredicted RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 NAT16Q8N8M0 369 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 ZNF557Q8N988 423 aaPredicted RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 TXNDC5Q8NBS9 432 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 TSTD1Q8NFU3 115 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 GPT2Q8TD30 523 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 SLC39A13Q96H72 371 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 GABRG3Q99928 467 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 CRACR2AQ9BSW2 395 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 NAA15Q9BXJ9 866 aaKnown RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 DUSP15Q9H1R2 295 aaPredicted RBP7.31□□□□□ -1.24
VPS50-218ENST00000485994 CD248Q9HCU0 757 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 SIX2Q9NPC8 291 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 PLCB1Q9NQ66 1216 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 ASNSD1Q9NWL6 643 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 NCDNQ9UBB6 729 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 RASAL2Q9UJF2 1139 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 HCN2Q9UL51 889 aa7.31□□□□□ -1.24
VPS50-218ENST00000485994 SPTBN2O15020 2390 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CABIN1Q9Y6J0 2220 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 PRRT4C9JH25 899 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 NEDD8-MDP1E9PL57 170 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 M0QYV0 167 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 SGK1O00141 431 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 ADAM23O75077 832 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 LETM1O95202 739 aaPredicted RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 EPN2O95208 641 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 KLF8O95600 359 aaPredicted RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 MBD3O95983 291 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CYBBP04839 570 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 ZNF806P0C7X5 589 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 LCP1P13796 627 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 GNA15P30679 374 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CDH5P33151 784 aaPredicted RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 CLCN1P35523 988 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 P2RY2P41231 377 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 ID4P47928 161 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 YWHAZP63104 245 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 MTA1Q13330 715 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 PUM1Q14671 1186 aaKnown RBP eCLIP7.3□□□□□ -1.24
VPS50-218ENST00000485994 EIF4HQ15056 248 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 PLK5Q496M5 336 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 TCP11X2Q5H9J9 407 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 EFHC1Q5JVL4 640 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 PIK3R6Q5UE93 754 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 KLHDC7AQ5VTJ3 777 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CDKAL1Q5VV42 579 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 NUGGCQ68CJ6 796 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 HEATR6Q6AI08 1181 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 SDE2Q6IQ49 451 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 TPGS1Q6ZTW0 290 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CEP68Q76N32 757 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 ERMP1Q7Z2K6 904 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 ZDHHC17Q8IUH5 632 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 DENND1CQ8IV53 801 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 FMNL3Q8IVF7 1028 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 SCUBE3Q8IX30 993 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 KIAA2013Q8IYS2 634 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 FAM160A2Q8N612 972 aaPredicted RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 UCMAQ8WVF2 138 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 NDRG1Q92597 394 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 GOLGA1Q92805 767 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 TMA16Q96EY4 203 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 P2RY11Q96G91 374 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 DDX50Q9BQ39 737 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 STK33Q9BYT3 514 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 POPDC2Q9HBU9 364 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 SAMSN1Q9NSI8 373 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 DNAJC17Q9NVM6 304 aaKnown RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 ANO10Q9NW15 660 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 THAP10Q9P2Z0 257 aaPredicted RBP7.3□□□□□ -1.24
VPS50-218ENST00000485994 SFMBT1Q9UHJ3 866 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CYTH4Q9UIA0 394 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 DNAJC12Q9UKB3 198 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 TLR6Q9Y2C9 796 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 NFE2L3Q9Y4A8 694 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 PCDHB3Q9Y5E6 796 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CEP192Q8TEP8 1941 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 CKAP5Q14008 2032 aa7.3□□□□□ -1.24
VPS50-218ENST00000485994 A0A1W2PQF6 199 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ANTXRLA6NF34 631 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 KCNJ18B7U540 433 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 SCAMP3O14828 347 aaKnown RBP7.29□□□□□ -1.24
VPS50-218ENST00000485994 TRIM24O15164 1050 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 PAPSS1O43252 624 aaPredicted RBP7.29□□□□□ -1.24
VPS50-218ENST00000485994 THAP12O43422 761 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ACSL4O60488 711 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 ZNF217O75362 1048 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 IGLV3-25P01717 112 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 NCAM1P13591 858 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 KRT5P13647 590 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 HOXC13P31276 330 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 KRT9P35527 623 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 SCNN1AP37088 669 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 DPP6P42658 865 aa7.29□□□□□ -1.24
VPS50-218ENST00000485994 GABRB2P47870 512 aa7.29□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms