RNA–Protein interactions for RNA: ENST00000485871.1

SND1-212, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 597 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-212ENST00000485871 PRPSAP2O60256 369 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 GPR37L1O60883 481 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 KRT1P04264 644 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 CD48P09326 243 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 DESP17661 470 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 POU3F3P20264 500 aaPredicted RBP11.75□□□□□ -0.53
SND1-212ENST00000485871 GABRR2P28476 465 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 PTPN7P35236 360 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 ADRA1BP35368 520 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 CCR2P41597 374 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 CDKN2BP42772 138 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 SSR1P43307 286 aaKnown RBP11.75□□□□□ -0.53
SND1-212ENST00000485871 AIF1P55008 147 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 SEMA3BQ13214 749 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 NME3Q13232 169 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 PPP2R5DQ14738 602 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 TRIP4Q15650 581 aaPredicted RBP11.75□□□□□ -0.53
SND1-212ENST00000485871 PPP2R5EQ16537 467 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 ZC3H12AQ5D1E8 599 aaKnown RBP11.75□□□□□ -0.53
SND1-212ENST00000485871 TCEAL5Q5H9L2 206 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 KCNT1Q5JUK3 1230 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 PRSS36Q5K4E3 855 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 BRMS1LQ5PSV4 323 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 ERMARDQ5T6L9 678 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 SCYL2Q6P3W7 929 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 MFSD7Q6UXD7 560 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 VSIG1Q86XK7 387 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 PSTKQ8IV42 348 aaKnown RBP11.75□□□□□ -0.53
SND1-212ENST00000485871 RCOR2Q8IZ40 523 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 RNF139Q8WU17 664 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 FAF2Q96CS3 445 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 SERPINB11Q96P15 392 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 RNF38Q9H0F5 515 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 FAM204AQ9H8W3 233 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 PCDH18Q9HCL0 1135 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.75□□□□□ -0.53
SND1-212ENST00000485871 SMARCAL1Q9NZC9 954 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 LMCD1Q9NZU5 365 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 MARCH2Q9P0N8 246 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 AP4E1Q9UPM8 1137 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 TLR6Q9Y2C9 796 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.75□□□□□ -0.53
SND1-212ENST00000485871 PIEZO1Q92508 2521 aa11.75□□□□□ -0.53
SND1-212ENST00000485871 PRRC2BQ5JSZ5 2229 aaKnown RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 hCG_1818297A0A087WSY0 165 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 SYNJ2BP-COX16A0A087WUM0 186 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 PI4K2BG5E9Z4 385 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 CEP104O60308 925 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 PTPN2P17706 415 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 KDELR1P24390 212 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 IL4RP24394 825 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 CDC25CP30307 473 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 L1CAMP32004 1257 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 GBP1P32455 592 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 COPS2P61201 443 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 CYP4F8P98187 520 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 RING1Q06587 406 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 EFEMP1Q12805 493 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 KLF1Q13351 362 aaPredicted RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 SIX1Q15475 284 aaPredicted RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 TAF12Q16514 161 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 PABPC1LQ4VXU2 614 aaKnown RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 C10orf120Q5SQS8 335 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 HECTD3Q5T447 861 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 POTEHQ6S545 545 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 SPOCD1Q6ZMY3 1216 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 HDXQ7Z353 690 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 SLC13A5Q86YT5 568 aaPredicted RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 EFHBQ8N7U6 833 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 SPATA4Q8NEY3 305 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 SHKBP1Q8TBC3 707 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 HSPH1Q92598 858 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 RNF25Q96BH1 459 aaPredicted RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 RBM41Q96IZ5 413 aaKnown RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 ZFRQ96KR1 1074 aaKnown RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 CAPZA3Q96KX2 299 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 SLC22A12Q96S37 553 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 KCTD15Q96SI1 283 aaPredicted RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 CDK5RAP1Q96SZ6 601 aaKnown RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 CORO1BQ9BR76 489 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 KLF16Q9BXK1 252 aaPredicted RBP11.74□□□□□ -0.53
SND1-212ENST00000485871 TKTL2Q9H0I9 626 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 TMEM51Q9NW97 253 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 COX16Q9P0S2 106 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 DPP7Q9UHL4 492 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 RASAL2Q9UJF2 1139 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 NEU3Q9UQ49 428 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 EFR3BQ9Y2G0 817 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 TRANK1O15050 2925 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 CHD5Q8TDI0 1954 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 DOCK8Q8NF50 2099 aa11.74□□□□□ -0.53
SND1-212ENST00000485871 CCDC195A0A1B0GUA6 201 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 TCRBV7S2A1N4TA0A589 114 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 LRRD1A4D1F6 860 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 ZNF487B1APH4 448 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 LINC01565O15544 149 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 RHOP08100 348 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 RHOXF2BP0C7M4 288 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 GJA1P17302 382 aa11.73□□□□□ -0.53
SND1-212ENST00000485871 PFKLP17858 780 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms