RNA–Protein interactions for RNA: ENST00000485867.5

SMC4-217, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 629 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-217ENST00000485867 SOAT2O75908 522 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 SLITRK3O94933 977 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 LYPLA2O95372 231 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 COL5A1P20908 1838 aaPredicted RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 CDC25CP30307 473 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 RPL9P32969 192 aaKnown RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 MCM4P33991 863 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 RARRES1P49788 294 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 NLRP5P59047 1200 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 DLG4P78352 724 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 AKAP17AQ02040 695 aaKnown RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 SLC14A1Q13336 389 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 SPTAN1Q13813 2472 aaKnown RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 PDGFRLQ15198 375 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 CRY1Q16526 586 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 INF2Q27J81 1249 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 SPDYCQ5MJ68 293 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 LMBRD2Q68DH5 695 aaPredicted RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 PPP4R3AQ6IN85 833 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 CENPPQ6IPU0 288 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 ALKAL1Q6UXT8 129 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 TTC30AQ86WT1 665 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 MARCH9Q86YJ5 346 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 NAXDQ8IW45 347 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 CMTM8Q8IZV2 173 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 ATAD1Q8NBU5 361 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 HAS1Q92839 578 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 USP13Q92995 863 aaPredicted RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 ZMAT2Q96NC0 199 aaKnown RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 GCNAQ96QF7 691 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 RNF26Q9BY78 433 aaPredicted RBP7.14□□□□□ -1.27
SMC4-217ENST00000485867 C2orf40Q9H1Z8 148 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 CLMPQ9H6B4 373 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 ECT2Q9H8V3 914 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 KIF9Q9HAQ2 790 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 SLC38A7Q9NVC3 462 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 GPR160Q9UJ42 338 aa7.14□□□□□ -1.27
SMC4-217ENST00000485867 TCHHQ07283 1943 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 MYLKQ15746 1914 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 MGAQ8IWI9 3026 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 TRABD2BA6NFA1 517 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 OR6C75A6NL08 312 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 NUAK1O60285 661 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 GREM1O60565 184 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 CBFA2T3O75081 653 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 ALDH1A2O94788 518 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 OAZ2O95190 189 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 ATE1O95260 518 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 PDIA4P13667 645 aaKnown RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 ITPKBP27987 946 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 RNF4P78317 190 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 CFHR1Q03591 330 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 YWHAHQ04917 246 aaPredicted RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 BFSP1Q12934 665 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 GPR17Q13304 367 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 NPY5RQ15761 445 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 NTRK3Q16288 839 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 C2orf27AQ580R0 203 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 ARSHQ5FYA8 562 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 CC2D1AQ6P1N0 951 aaPredicted RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 RNF111Q6ZNA4 994 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 MAEAQ7L5Y9 396 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 RABEPKQ7Z6M1 372 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 TMEM150AQ86TG1 271 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 ITIH5Q86UX2 942 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 BLIDQ8IZY5 108 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 CPA6Q8N4T0 437 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 CCDC33Q8N5R6 958 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 CCDC26Q8TAB7 109 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 C18orf25Q96B23 403 aaPredicted RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 CCDC43Q96MW1 224 aaKnown RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 EIF2AK1Q9BQI3 630 aaKnown RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 CCDC94Q9BW85 323 aaPredicted RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 SLC26A6Q9BXS9 759 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 KRTAP4-2Q9BYR5 136 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 BRMS1Q9HCU9 246 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 GCM1Q9NP62 436 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 SH3GLB2Q9NR46 395 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 TOPORSQ9NS56 1045 aaPredicted RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 TDP1Q9NUW8 608 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 GMIPQ9P107 970 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 KIAA1522Q9P206 1035 aaPredicted RBP7.13□□□□□ -1.27
SMC4-217ENST00000485867 ZMYM5Q9UJ78 669 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 PCDHB14Q9Y5E9 798 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 SCN1AP35498 2009 aa7.13□□□□□ -1.27
SMC4-217ENST00000485867 AHCTF1Q8WYP5 2266 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 A0A087WWV3 80 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 TEX51A0A1B0GUA7 166 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 K7EQS6 105 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 M0QZQ0 153 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 CAPN9O14815 690 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 LARGE1O95461 756 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 SYPP08247 313 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 KCNE1P15382 129 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 GCFC2P16383 781 aaKnown RBP7.12□□□□□ -1.27
SMC4-217ENST00000485867 ATF6P18850 670 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 MARCKSP29966 332 aaPredicted RBP7.12□□□□□ -1.27
SMC4-217ENST00000485867 AVPR1AP37288 418 aa7.12□□□□□ -1.27
SMC4-217ENST00000485867 SRSF1Q07955 248 aaKnown RBP eCLIP7.12□□□□□ -1.279e-8■■□□□ 13.7
SMC4-217ENST00000485867 ZNF268Q14587 947 aaPredicted RBP7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms