RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ZNF852Q6ZMS4 543 aa6□□□□□ -1.45
CUX1-208ENST00000485792 TPRG1Q6ZUI0 275 aa6□□□□□ -1.45
CUX1-208ENST00000485792 DDX42Q86XP3 938 aaKnown RBP eCLIP6□□□□□ -1.45
CUX1-208ENST00000485792 ANKMY2Q8IV38 441 aa6□□□□□ -1.45
CUX1-208ENST00000485792 SUGP1Q8IWZ8 645 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 DTWD2Q8NBA8 298 aa6□□□□□ -1.45
CUX1-208ENST00000485792 UBA3Q8TBC4 463 aa6□□□□□ -1.45
CUX1-208ENST00000485792 WFDC5Q8TCV5 224 aa6□□□□□ -1.45
CUX1-208ENST00000485792 SH3RF2Q8TEC5 729 aa6□□□□□ -1.45
CUX1-208ENST00000485792 SLC20A1Q8WUM9 679 aa6□□□□□ -1.45
CUX1-208ENST00000485792 IRGQQ8WZA9 623 aa6□□□□□ -1.45
CUX1-208ENST00000485792 SECISBP2LQ93073 1101 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 FBXO32Q969P5 355 aa6□□□□□ -1.45
CUX1-208ENST00000485792 PRICKLE1Q96MT3 831 aaPredicted RBP6□□□□□ -1.45
CUX1-208ENST00000485792 GCNAQ96QF7 691 aa6□□□□□ -1.45
CUX1-208ENST00000485792 TTYH3Q9C0H2 523 aa6□□□□□ -1.45
CUX1-208ENST00000485792 DNAI2Q9GZS0 605 aa6□□□□□ -1.45
CUX1-208ENST00000485792 LHX5Q9H2C1 402 aa6□□□□□ -1.45
CUX1-208ENST00000485792 EBF3Q9H4W6 596 aa6□□□□□ -1.45
CUX1-208ENST00000485792 SLITRK6Q9H5Y7 841 aa6□□□□□ -1.45
CUX1-208ENST00000485792 ZNF395Q9H8N7 513 aaPredicted RBP6□□□□□ -1.45
CUX1-208ENST00000485792 ECT2Q9H8V3 914 aa6□□□□□ -1.45
CUX1-208ENST00000485792 UBE2TQ9NPD8 197 aaPredicted RBP6□□□□□ -1.45
CUX1-208ENST00000485792 CD93Q9NPY3 652 aa6□□□□□ -1.45
CUX1-208ENST00000485792 CNGB3Q9NQW8 809 aa6□□□□□ -1.45
CUX1-208ENST00000485792 PRMT8Q9NR22 394 aaPredicted RBP6□□□□□ -1.45
CUX1-208ENST00000485792 TLR8Q9NR97 1041 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 THG1LQ9NWX6 298 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 SMPD4Q9NXE4 827 aa6□□□□□ -1.45
CUX1-208ENST00000485792 MARK1Q9P0L2 795 aa6□□□□□ -1.45
CUX1-208ENST00000485792 XPO7Q9UIA9 1087 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 NOCTQ9UK39 431 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 ZMIZ1Q9ULJ6 1067 aa6□□□□□ -1.45
CUX1-208ENST00000485792 NOVA2Q9UNW9 492 aaKnown RBP6□□□□□ -1.45
CUX1-208ENST00000485792 HRH3Q9Y5N1 445 aa6□□□□□ -1.45
CUX1-208ENST00000485792 CACNA1AO00555 2505 aa6□□□□□ -1.45
CUX1-208ENST00000485792 ARID1BQ8NFD5 2236 aaPredicted RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 PCDH15Q96QU1 1955 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 FAM170BA6NMN3 283 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 K7ESF4 209 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 MEN1O00255 615 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 HOXC11O43248 304 aaPredicted RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 PAPSS1O43252 624 aaPredicted RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 MSI1O43347 362 aaKnown RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 LILRB5O75023 590 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 STC2O76061 302 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 GJB6O95452 261 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 ERBB2P04626 1255 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 CKMP06732 381 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 UCHL3P15374 230 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 TRIM21P19474 475 aaKnown RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 ATP5C1P36542 298 aaKnown RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 PBX1P40424 430 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 RGS7P49802 495 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 MFAP3P55082 362 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 RING1Q06587 406 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 TRIP4Q15650 581 aaPredicted RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 STX1AQ16623 288 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 PTPN20Q4JDL3 420 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 ANO6Q4KMQ2 910 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 C2CD6Q53TS8 623 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 NADSYN1Q6IA69 706 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 TSSK4Q6SA08 328 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 BNIPLQ7Z465 357 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 NOP9Q86U38 636 aaKnown RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 SLC47A2Q86VL8 602 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 C1orf210Q8IVY1 113 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 BBS7Q8IWZ6 715 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 AOPEPQ8N6M6 819 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 ZBTB44Q8NCP5 570 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 FAM3CQ92520 227 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 ATP2A3Q93084 1043 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 NT5C3BQ969T7 300 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 AZIN2Q96A70 460 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 VOPP1Q96AW1 172 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 CPXM1Q96SM3 734 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 INSM2Q96T92 566 aaPredicted RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 MED10Q9BTT4 135 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 STK33Q9BYT3 514 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 ULBP1Q9BZM6 244 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 TRPC7Q9HCX4 862 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 ZNF358Q9NW07 568 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 DUS2Q9NX74 493 aaKnown RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 TBC1D14Q9P2M4 693 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 DNAJC12Q9UKB3 198 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 FBXO4Q9UKT5 387 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 FBXL21Q9UKT6 434 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 NEU3Q9UQ49 428 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 MRPS17Q9Y2R5 130 aaKnown RBP5.99□□□□□ -1.45
CUX1-208ENST00000485792 STARD13Q9Y3M8 1113 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 HCN4Q9Y3Q4 1203 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 PCDHB4Q9Y5E5 795 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 CPQQ9Y646 472 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 PIAS3Q9Y6X2 628 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 TRPM6Q9BX84 2022 aa5.99□□□□□ -1.45
CUX1-208ENST00000485792 PLXNA2O75051 1894 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 A0A1B0GTH6 734 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 TCRBV5S1A1TA0A578 114 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 SYCE3A1L190 88 aa5.98□□□□□ -1.45
CUX1-208ENST00000485792 LGALS16A8MUM7 142 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms