RNA–Protein interactions for RNA: ENST00000485628.2

APOE-205, Transcript of apolipoprotein E, humanhuman

TSL 1 (best)

Gene APOE, Length 771 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOE-205ENST00000485628 LATS1O95835 1130 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 CKMP06732 381 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 CTNNA2P26232 953 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 CTNNA1P35221 906 aaKnown RBP16.44■□□□□ 0.22
APOE-205ENST00000485628 AVPR1AP37288 418 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 MTA1Q13330 715 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 C5orf22Q49AR2 442 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 BOLA3Q53S33 107 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 NUGGCQ68CJ6 796 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 GET4Q7L5D6 327 aaPredicted RBP16.44■□□□□ 0.22
APOE-205ENST00000485628 DDX42Q86XP3 938 aaKnown RBP eCLIP16.44■□□□□ 0.22
APOE-205ENST00000485628 UNC45BQ8IWX7 931 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 ZNF683Q8IZ20 524 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 PPM1EQ8WY54 764 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 OSBPL2Q9H1P3 480 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 KIF9Q9HAQ2 790 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 XPO7Q9UIA9 1087 aaKnown RBP16.44■□□□□ 0.22
APOE-205ENST00000485628 PCDHA3Q9Y5H8 950 aa16.44■□□□□ 0.22
APOE-205ENST00000485628 C3orf70A6NLC5 250 aaPredicted RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 PSTPIP1O43586 416 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 RARAP10276 462 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 MLLT6P55198 1093 aaPredicted RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 NAP1L1P55209 391 aaKnown RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 TAZQ16635 292 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 PUS10Q3MIT2 529 aaKnown RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 ATP13A4Q4VNC1 1196 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 ERMARDQ5T6L9 678 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 MANEALQ5VSG8 457 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 NADSYN1Q6IA69 706 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 CELF5Q8N6W0 485 aaKnown RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 SH3RF2Q8TEC5 729 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 BTN2A3PQ96KV6 586 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 SNRNP25Q9BV90 132 aaKnown RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 PHF7Q9BWX1 381 aaPredicted RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 TLR10Q9BXR5 811 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 MAGEB5Q9BZ81 275 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 TKTL2Q9H0I9 626 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 SMG9Q9H0W8 520 aaKnown RBP16.43■□□□□ 0.22
APOE-205ENST00000485628 TMPRSS4Q9NRS4 437 aa16.43■□□□□ 0.22
APOE-205ENST00000485628 DOCK4Q8N1I0 1966 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 TMEM110-MUSTN1A8MSY1 372 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 FTCDO95954 541 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 SKIV2LQ15477 1246 aaKnown RBP16.42■□□□□ 0.22
APOE-205ENST00000485628 DPYSL2Q16555 572 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 CA9Q16790 459 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 FAM133BQ5BKY9 247 aaKnown RBP16.42■□□□□ 0.22
APOE-205ENST00000485628 ZNF569Q5MCW4 686 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 ACBD5Q5T8D3 534 aaPredicted RBP16.42■□□□□ 0.22
APOE-205ENST00000485628 PIK3R6Q5UE93 754 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 RNF43Q68DV7 783 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 TANGO2Q6ICL3 276 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 SND1Q7KZF4 910 aaKnown RBP eCLIP16.42■□□□□ 0.22
APOE-205ENST00000485628 OTOP3Q7RTS5 596 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 VSIG1Q86XK7 387 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 RHOT1Q8IXI2 618 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 SLC35F6Q8N357 371 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 TSC1Q92574 1164 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 ALG3Q92685 438 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 KRT35Q92764 455 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 WDR24Q96S15 920 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 DCLK3Q9C098 648 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 NACA2Q9H009 215 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 PRDM6Q9NQX0 595 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 SMPD4Q9NXE4 827 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 PCSK1NQ9UHG2 260 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 AMFRQ9UKV5 643 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 AGO1Q9UL18 857 aaKnown RBP16.42■□□□□ 0.22
APOE-205ENST00000485628 NEU3Q9UQ49 428 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 JRKLQ9Y4A0 524 aa16.42■□□□□ 0.22
APOE-205ENST00000485628 IGLV3-10A0A075B6K4 115 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 CCDC66A2RUB6 948 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 MIF4GDA9UHW6 222 aaKnown RBP16.41■□□□□ 0.22
APOE-205ENST00000485628 ZNF487B1APH4 448 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 PRPSAP2O60256 369 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 KIF5CO60282 957 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 ACSL4O60488 711 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 PAGE1O75459 146 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 KRT7P08729 469 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 DESP17661 470 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 IL4RP24394 825 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 CORO1AP31146 461 aaKnown RBP16.41■□□□□ 0.22
APOE-205ENST00000485628 HOXC13P31276 330 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 L1CAMP32004 1257 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 VIPR2P41587 438 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 MARCKSL1P49006 195 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 ETF1P62495 437 aaKnown RBP16.41■□□□□ 0.22
APOE-205ENST00000485628 FCHO2Q0JRZ9 810 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 HADHQ16836 314 aaKnown RBP16.41■□□□□ 0.22
APOE-205ENST00000485628 MS4A13Q5J8X5 152 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 PEX26Q7Z412 305 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 KATNAL2Q8IYT4 538 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 ZDHHC14Q8IZN3 488 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 ATP6V0D2Q8N8Y2 350 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 E2F7Q96AV8 911 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 ELSPBP1Q96BH3 223 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 P2RY11Q96G91 374 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 ALS2CR12Q96Q35 445 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 SLITRK6Q9H5Y7 841 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 CFAP97Q9P2B7 532 aa16.41■□□□□ 0.22
APOE-205ENST00000485628 ZNF510Q9Y2H8 683 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms