RNA–Protein interactions for RNA: ENST00000485513.1

HLA-F-227, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 778 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-227ENST00000485513 WDR3Q9UNX4 943 aaKnown RBP eCLIP26.83■■□□□ 1.89
HLA-F-227ENST00000485513 CTNND2Q9UQB3 1225 aa26.83■■□□□ 1.89
HLA-F-227ENST00000485513 RNF225M0QZC1 329 aaPredicted RBP26.82■■□□□ 1.88
HLA-F-227ENST00000485513 TSPAN3O60637 253 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 CEACAM1P13688 526 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 MORC3Q14149 939 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 ZNF234Q14588 700 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 STILQ15468 1287 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 PMF1Q6P1K2 205 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 ZSWIM1Q9BR11 485 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 PRDM16Q9HAZ2 1276 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 KMT2BQ9UMN6 2715 aaPredicted RBP26.82■■□□□ 1.88
HLA-F-227ENST00000485513 ADAMTS9Q9P2N4 1935 aa26.82■■□□□ 1.88
HLA-F-227ENST00000485513 M0QYV0 167 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 BIN1O00499 593 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 MSI1O43347 362 aaKnown RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 SYNCRIPO60506 623 aaKnown RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 LATS1O95835 1130 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 SERPINF2P08697 491 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 BRD2P25440 801 aaKnown RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 HOXD9P28356 352 aaPredicted RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 ATXN3P54252 364 aaPredicted RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 ZNF445P59923 1031 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 GFPT1Q06210 699 aaPredicted RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 ZNF252P-AS1Q0IIN9 211 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 RRAGAQ7L523 313 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 METTL3Q86U44 580 aaKnown RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 RBBP8NLQ8NC74 664 aaPredicted RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 IRGQQ8WZA9 623 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 ZNF419Q96HQ0 510 aaPredicted RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 MKRN2Q9H000 416 aaKnown RBP26.81■■□□□ 1.88
HLA-F-227ENST00000485513 FSCN3Q9NQT6 498 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 STOML2Q9UJZ1 356 aa26.81■■□□□ 1.88
HLA-F-227ENST00000485513 PIK3R2O00459 728 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 TIMM44O43615 452 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 GABBR2O75899 941 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 ARID5AQ03989 594 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 ADGRF1Q5T601 910 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 TMEM215Q68D42 235 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 MSANTD2Q6P1R3 559 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 ARHGEF19Q8IW93 802 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 SORCS1Q8WY21 1168 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 TMA16Q96EY4 203 aaKnown RBP26.8■■□□□ 1.88
HLA-F-227ENST00000485513 GTPBP2Q9BX10 602 aaKnown RBP26.8■■□□□ 1.88
HLA-F-227ENST00000485513 CAPN10Q9HC96 672 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 CEP295Q9C0D2 2601 aa26.8■■□□□ 1.88
HLA-F-227ENST00000485513 CKAP5Q14008 2032 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 GNA14O95837 355 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 CALCAP01258 141 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 CD6P30203 668 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 STX17P56962 302 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 GCNT1Q02742 428 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 KCNH2Q12809 1159 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 ST3GAL2Q16842 350 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 SYCP2LQ5T4T6 812 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 TRIM59Q8IWR1 403 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 RGL4Q8IZJ4 473 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 EHBP1Q8NDI1 1231 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 DEFB124Q8NES8 71 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 FOXJ1Q92949 421 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 HSFY1Q96LI6 401 aa26.79■■□□□ 1.88
HLA-F-227ENST00000485513 USP36Q9P275 1121 aaKnown RBP26.79■■□□□ 1.88
HLA-F-227ENST00000485513 GADD45BO75293 160 aaPredicted RBP26.78■■□□□ 1.88
HLA-F-227ENST00000485513 LTFP02788 710 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 NCAM1P13591 858 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 PRKCHP24723 683 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 PAK1Q13153 545 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 SERPINA13PQ6UXR4 307 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 TMPRSS6Q8IU80 811 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 GOLGA1Q92805 767 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 SIPA1Q96FS4 1042 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 TOE1Q96GM8 510 aaKnown RBP26.78■■□□□ 1.88
HLA-F-227ENST00000485513 ITM2CQ9NQX7 267 aa26.78■■□□□ 1.88
HLA-F-227ENST00000485513 PCDH15Q96QU1 1955 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 FBXO21O94952 628 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 EPHX1P07099 455 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 HLA-FP30511 346 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 HDDC3Q8N4P3 179 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 WFIKKN2Q8TEU8 576 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 CLEC4CQ8WTT0 213 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 PRCCQ92733 491 aaPredicted RBP26.77■■□□□ 1.88
HLA-F-227ENST00000485513 SLC32A1Q9H598 525 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 WSB2Q9NYS7 404 aaPredicted RBP26.77■■□□□ 1.88
HLA-F-227ENST00000485513 SUSD2Q9UGT4 822 aa26.77■■□□□ 1.88
HLA-F-227ENST00000485513 UTP18Q9Y5J1 556 aaKnown RBP eCLIP26.77■■□□□ 1.88
HLA-F-227ENST00000485513 IGLV3-27P01718 113 aa26.76■■□□□ 1.87
HLA-F-227ENST00000485513 AFPP02771 609 aaKnown RBP26.76■■□□□ 1.87
HLA-F-227ENST00000485513 MARSP56192 900 aaKnown RBP26.76■■□□□ 1.87
HLA-F-227ENST00000485513 WDR45BQ5MNZ6 344 aa26.76■■□□□ 1.87
HLA-F-227ENST00000485513 NUGGCQ68CJ6 796 aa26.76■■□□□ 1.87
HLA-F-227ENST00000485513 UNC45BQ8IWX7 931 aa26.76■■□□□ 1.87
HLA-F-227ENST00000485513 KREMEN1Q96MU8 473 aa26.76■■□□□ 1.87
HLA-F-227ENST00000485513 SRRTQ9BXP5 876 aaKnown RBP26.76■■□□□ 1.87
HLA-F-227ENST00000485513 MIS12Q9H081 205 aa26.76■■□□□ 1.87
HLA-F-227ENST00000485513 INTS2Q9H0H0 1204 aaKnown RBP26.76■■□□□ 1.87
HLA-F-227ENST00000485513 ABCB8Q9NUT2 735 aa26.76■■□□□ 1.87
HLA-F-227ENST00000485513 PCNX2A6NKB5 2137 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 KCNJ18B7U540 433 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 ARHGAP33O14559 1287 aa26.75■■□□□ 1.87
HLA-F-227ENST00000485513 SYPP08247 313 aa26.75■■□□□ 1.87
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms