RNA–Protein interactions for RNA: ENST00000485397.1

COL27A1-205, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 5

Gene COL27A1, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-205ENST00000485397 TPMTP51580 245 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 ZNF132P52740 706 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 COPAP53621 1224 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 EIF4HQ15056 248 aaKnown RBP20.1■□□□□ 0.81
COL27A1-205ENST00000485397 COBLL1Q53SF7 1204 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 BSPRYQ5W0U4 402 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 CACUL1Q86Y37 369 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 UBR7Q8N806 425 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 KDF1Q8NAX2 398 aaPredicted RBP20.1■□□□□ 0.81
COL27A1-205ENST00000485397 RNF139Q8WU17 664 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 SLC35C1Q96A29 364 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 CAMK1GQ96NX5 476 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 IPO9Q96P70 1041 aaKnown RBP20.1■□□□□ 0.81
COL27A1-205ENST00000485397 SLC2A11Q9BYW1 496 aa20.1■□□□□ 0.81
COL27A1-205ENST00000485397 OLA1Q9NTK5 396 aaKnown RBP20.1■□□□□ 0.81
COL27A1-205ENST00000485397 RALYQ9UKM9 306 aaKnown RBP20.1■□□□□ 0.81
COL27A1-205ENST00000485397 MEI4A8MW99 385 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 O00370 1275 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 GJB3O75712 270 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 EPHX1P07099 455 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 VDRP11473 427 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 HLA-EP13747 358 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 LCP1P13796 627 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 GNSP15586 552 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 HOXD9P28356 352 aaPredicted RBP20.09■□□□□ 0.81
COL27A1-205ENST00000485397 HARS2P49590 506 aaKnown RBP20.09■□□□□ 0.81
COL27A1-205ENST00000485397 YWHAEP62258 255 aaKnown RBP20.09■□□□□ 0.81
COL27A1-205ENST00000485397 MPPE1Q53F39 396 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 DNASE2BQ8WZ79 361 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 PRCCQ92733 491 aaPredicted RBP20.09■□□□□ 0.81
COL27A1-205ENST00000485397 GSDMAQ96QA5 445 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 ARMCX3Q9UH62 379 aaPredicted RBP20.09■□□□□ 0.81
COL27A1-205ENST00000485397 KLK13Q9UKR3 277 aa20.09■□□□□ 0.81
COL27A1-205ENST00000485397 HBS1LQ9Y450 684 aaKnown RBP20.09■□□□□ 0.81
COL27A1-205ENST00000485397 MSI1O43347 362 aaKnown RBP20.08■□□□□ 0.81
COL27A1-205ENST00000485397 SH3BP5O60239 455 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 GABBR2O75899 941 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 HLA-FP30511 346 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 GRIK2Q13002 908 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 PKDCCQ504Y2 493 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 DCAF12L1Q5VU92 463 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 SERPINA13PQ6UXR4 307 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 SIX6OS1Q8N1H7 587 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 ZCCHC9Q8N567 271 aaKnown RBP20.08■□□□□ 0.81
COL27A1-205ENST00000485397 ENGASEQ8NFI3 743 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 KCTD13Q8WZ19 329 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 TFAP2BQ92481 460 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 MIR1-1HGQ9H1L0 117 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 NEUROG3Q9Y4Z2 214 aa20.08■□□□□ 0.81
COL27A1-205ENST00000485397 ZFHX4Q86UP3 3567 aa20.08■□□□□ 0.8
COL27A1-205ENST00000485397 A0A1B0GTW7 788 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 PIK3R2O00459 728 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 TIMM44O43615 452 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 SMC2O95347 1197 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 SETSIPP0DME0 302 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 OXTRP30559 389 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 RGS7P49802 495 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 DAOAP59103 153 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 ARID5AQ03989 594 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 ISM2Q6H9L7 571 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 TMEM270Q6UE05 265 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 CHCHD4Q8N4Q1 142 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 CADM4Q8NFZ8 388 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 SPATA20Q8TB22 786 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 CYB5D2Q8WUJ1 264 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 SMARCE1Q969G3 411 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 TMA16Q96EY4 203 aaKnown RBP20.07■□□□□ 0.8
COL27A1-205ENST00000485397 ZSWIM1Q9BR11 485 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 CNGB3Q9NQW8 809 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 ABCC13Q9NSE7 274 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 STOML2Q9UJZ1 356 aa20.07■□□□□ 0.8
COL27A1-205ENST00000485397 METTL12A8MUP2 240 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 CALCAP01258 141 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 IGLV3-19P01714 112 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 ACADMP11310 421 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 TBXAS1P24557 533 aaPredicted RBP20.06■□□□□ 0.8
COL27A1-205ENST00000485397 FMO5P49326 533 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 SGSHP51688 502 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 LRRC63Q05C16 580 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 SLC14A1Q13336 389 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 E2F5Q15329 346 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 ADGRF1Q5T601 910 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 PMF1Q6P1K2 205 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 LCLAT1Q6UWP7 414 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 CHST9Q7L1S5 443 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 FAM124AQ86V42 546 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 ZNF366Q8N895 744 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 OR2T3Q8NH03 318 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 KAT5Q92993 513 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 NUP58Q9BVL2 599 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 KIAA1257Q9ULG3 409 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 MSRB2Q9Y3D2 182 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 PCDHB4Q9Y5E5 795 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 FRYQ5TBA9 3013 aa20.06■□□□□ 0.8
COL27A1-205ENST00000485397 GOLGA6L7A0A1B0GV03 622 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 GOLGA6L4A6NEF3 574 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 RNF225M0QZC1 329 aaPredicted RBP20.05■□□□□ 0.8
COL27A1-205ENST00000485397 FNDC3BQ53EP0 1204 aaKnown RBP20.05■□□□□ 0.8
COL27A1-205ENST00000485397 ADIPOR2Q86V24 386 aa20.05■□□□□ 0.8
COL27A1-205ENST00000485397 SCML4Q8N228 414 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms