RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 RAD54BQ9Y620 910 aa9.02□□□□□ -0.97
DDX39B-221ENST00000484566 MYH10P35580 1976 aa9.02□□□□□ -0.97
DDX39B-221ENST00000484566 CACNA1DQ01668 2161 aa9.02□□□□□ -0.97
DDX39B-221ENST00000484566 MUC22E2RYF6 1773 aaPredicted RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 B8ZZF3 427 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 GFRA2O00451 464 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 RRP8O43159 456 aaKnown RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 COCHO43405 550 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 TNFSF14O43557 240 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 RTN3O95197 1032 aaPredicted RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 TNNC2P02585 160 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 HSP90AA1P07900 732 aaKnown RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 PDGFRBP09619 1106 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 IRF1P10914 325 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 GP1BBP13224 206 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 WARSP23381 471 aaKnown RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 LMO2P25791 158 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 YWHAQP27348 245 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 ADSSP30520 456 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 OXTRP30559 389 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 DDIT3P35638 169 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 HNF1BP35680 557 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 GRK6P43250 576 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 TUBP50607 506 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 SMAD1Q15797 465 aaKnown RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 DBN1Q16643 649 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 CRTC2Q53ET0 693 aaPredicted RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 ARL6IP4Q66PJ3 421 aaKnown RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 TMEM25Q86YD3 366 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 SNX19Q92543 992 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 RAD54LQ92698 747 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 HPDLQ96IR7 371 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 IPO9Q96P70 1041 aaKnown RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 MMS19Q96T76 1030 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 BBS2Q9BXC9 721 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 SLC6A17Q9H1V8 727 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 SNX25Q9H3E2 840 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 CD248Q9HCU0 757 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 WSB2Q9NYS7 404 aaPredicted RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 SIX4Q9UIU6 781 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 HCN2Q9UL51 889 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 LIMCH1Q9UPQ0 1083 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 ITPR2Q14571 2701 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 ATP8B3O60423 1300 aa9.01□□□□□ -0.97
DDX39B-221ENST00000484566 COL5A1P20908 1838 aaPredicted RBP9.01□□□□□ -0.97
DDX39B-221ENST00000484566 TMEM131Q92545 1883 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 ZFHX3Q15911 3703 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 POLQO75417 2590 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 UTP20O75691 2785 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 TEX51A0A1B0GUA7 166 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 A0A1B0GVT2 93 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 SERTM1A2A2V5 107 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 TRIM24O15164 1050 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 CACNG3O60359 315 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 ACADMP11310 421 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 TYRP14679 529 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 GARTP22102 1010 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 BRD2P25440 801 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 ITPKBP27987 946 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 NOS2P35228 1153 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 DGKGP49619 791 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 CCT8P50990 548 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 AFF3P51826 1226 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 GOLGA8FQ08AF8 430 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 GOLGA8DPQ0D2H9 430 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 TEAD4Q15561 434 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 ARSJQ5FYB0 599 aaPredicted RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 MCTP1Q6DN14 999 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 DHRS13Q6UX07 377 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 ZNF720Q7Z2F6 126 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 TMPRSS12Q86WS5 348 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 SFR1Q86XK3 245 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 SYCP3Q8IZU3 236 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 NUP93Q8N1F7 819 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 CXorf38Q8TB03 319 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 LARP4BQ92615 738 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 ZNF837Q96EG3 531 aaPredicted RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 FAM84AQ96KN4 292 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 ACCSQ96QU6 501 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 MRPL44Q9H9J2 332 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 NEUROD4Q9HD90 331 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9□□□□□ -0.977e-7■■■□□ 17.3
DDX39B-221ENST00000484566 ZDHHC3Q9NYG2 299 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 MARK1Q9P0L2 795 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 USP36Q9P275 1121 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 WDR35Q9P2L0 1181 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 FTSJ1Q9UET6 329 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 EIF2B4Q9UI10 523 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 LSM7Q9UK45 103 aaKnown RBP9□□□□□ -0.97
DDX39B-221ENST00000484566 KIF3AQ9Y496 699 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 FBN3Q75N90 2809 aa9□□□□□ -0.97
DDX39B-221ENST00000484566 GOLGA8IPA6NC78 632 aa8.99□□□□□ -0.97
DDX39B-221ENST00000484566 GOLGA8JA6NMD2 632 aa8.99□□□□□ -0.97
DDX39B-221ENST00000484566 METTL12A8MUP2 240 aa8.99□□□□□ -0.97
DDX39B-221ENST00000484566 PRRT4C9JH25 899 aa8.99□□□□□ -0.97
DDX39B-221ENST00000484566 PLK4O00444 970 aa8.99□□□□□ -0.97
DDX39B-221ENST00000484566 SYNCRIPO60506 623 aaKnown RBP8.99□□□□□ -0.97
DDX39B-221ENST00000484566 PRPF6O94906 941 aaKnown RBP8.99□□□□□ -0.97
DDX39B-221ENST00000484566 GNL1P36915 607 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms