RNA–Protein interactions for RNA: ENST00000484252.5

LIMS2-215, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 2,099 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-215ENST00000484252 NME7Q9Y5B8 376 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 CITO14578 2027 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 RBM47A0AV96 593 aaKnown RBP20.31■□□□□ 0.84
LIMS2-215ENST00000484252 A6NHS1 94 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 B2RBV5 119 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 F8W8V4 182 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 CYB561D2O14569 222 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 NPTXRO95502 500 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 AQP5P55064 265 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 RBBP5Q15291 538 aaKnown RBP20.31■□□□□ 0.84
LIMS2-215ENST00000484252 DNAL1Q4LDG9 190 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 FAM182AQ5T1J6 154 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 PSTKQ8IV42 348 aaKnown RBP20.31■□□□□ 0.84
LIMS2-215ENST00000484252 APLFQ8IW19 511 aaPredicted RBP20.31■□□□□ 0.84
LIMS2-215ENST00000484252 PDCD7Q8N8D1 485 aaKnown RBP20.31■□□□□ 0.84
LIMS2-215ENST00000484252 LRRN4Q8WUT4 740 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 OLFM3Q96PB7 478 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 STN1Q9H668 368 aaKnown RBP20.31■□□□□ 0.84
LIMS2-215ENST00000484252 ZFATQ9P243 1243 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 RALGAPA2Q2PPJ7 1873 aa20.31■□□□□ 0.84
LIMS2-215ENST00000484252 UTRNP46939 3433 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 CCDC195A0A1B0GUA6 201 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 SDR42E2A6NKP2 422 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 SPECC1L-ADORA2AF8WAN1 911 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 KRT36O76013 467 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 STK10O94804 968 aaKnown RBP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ZNF286BP0CG31 522 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ARL4AP40617 200 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 SNX30Q5VWJ9 437 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 CES4AQ5XG92 561 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 LRRC8BQ6P9F7 803 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ADGRF2Q8IZF7 708 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 FERMT1Q9BQL6 677 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 FAM167BQ9BTA0 163 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 NAT9Q9BTE0 207 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 NMRK1Q9NWW6 199 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 DICER1Q9UPY3 1922 aaKnown RBP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 H3BRB1 525 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 PPEF2O14830 753 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 GLRA3O75311 464 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 SKAP2O75563 359 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ENO1P06733 434 aaKnown RBP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 SERPINA6P08185 405 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 NIPAL4Q0D2K0 466 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 GJC2Q5T442 439 aaPredicted RBP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ANO7Q6IWH7 933 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 MAMDC4Q6UXC1 1216 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 TREML1Q86YW5 311 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 CRYBG2Q8N1P7 616 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 NLGN2Q8NFZ4 835 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ATP2A3Q93084 1043 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 HSFY1Q96LI6 401 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ZMAT2Q96NC0 199 aaKnown RBP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 TUT1Q9H6E5 874 aaKnown RBP20.3■□□□□ 0.84
LIMS2-215ENST00000484252 SNTG2Q9NY99 539 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 ZNF212Q9UDV6 495 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 USP3Q9Y6I4 520 aa20.3■□□□□ 0.84
LIMS2-215ENST00000484252 H3BRJ5 948 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 CAPN9O14815 690 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 GRIK4Q16099 956 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 SOWAHAQ2M3V2 549 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 SLC27A1Q6PCB7 646 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 DENND5BQ6ZUT9 1274 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 NET1Q7Z628 596 aaPredicted RBP20.29■□□□□ 0.84
LIMS2-215ENST00000484252 C7orf31Q8N865 590 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 PPP1R14CQ8TAE6 165 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 WDR60Q8WVS4 1066 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 TRIM56Q9BRZ2 755 aaKnown RBP20.29■□□□□ 0.84
LIMS2-215ENST00000484252 CCDC106Q9BWC9 280 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 TUBGCP4Q9UGJ1 667 aa20.29■□□□□ 0.84
LIMS2-215ENST00000484252 OPHN1O60890 802 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 AMPD1P23109 780 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 CDC25CP30307 473 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 GRIA1P42261 906 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 ATXN1P54253 815 aaKnown RBP20.28■□□□□ 0.84
LIMS2-215ENST00000484252 FASTKD1Q53R41 847 aaKnown RBP20.28■□□□□ 0.84
LIMS2-215ENST00000484252 EFHC1Q5JVL4 640 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 C6orf163Q5TEZ5 329 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 LRRC74BQ6ZQY2 392 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 WDR75Q8IWA0 830 aaKnown RBP20.28■□□□□ 0.84
LIMS2-215ENST00000484252 CCDC185Q8N715 623 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 PPFIBP2Q8ND30 876 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 CLEC4CQ8WTT0 213 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 C1orf21Q9H246 121 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 DCDC2Q9UHG0 476 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 WDR27A2RRH5 827 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 ZNF189O75820 626 aaPredicted RBP20.28■□□□□ 0.84
LIMS2-215ENST00000484252 CIB2O75838 187 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 SKIP12755 728 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 LCP1P13796 627 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 VAV1P15498 845 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 PGAM1P18669 254 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 KLC1Q07866 573 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 AP1B1Q10567 949 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 ZNF792Q3KQV3 632 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 C9orf57Q5W0N0 161 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 PACS1Q6VY07 963 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 RNF217Q8TC41 542 aa20.28■□□□□ 0.84
LIMS2-215ENST00000484252 GTF3C2Q8WUA4 911 aaPredicted RBP20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms