RNA–Protein interactions for RNA: ENST00000483847.1

SMARCC1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 2

Gene SMARCC1, Length 804 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-205ENST00000483847 XXYLT1Q8NBI6 393 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 ZNF507Q8TCN5 953 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CYB5D2Q8WUJ1 264 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 CNDP2Q96KP4 475 aaKnown RBP11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 SLC6A18Q96N87 628 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 NRSN2Q9GZP1 204 aa11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 AGO1Q9UL18 857 aaKnown RBP11.41□□□□□ -0.58
SMARCC1-205ENST00000483847 VILLO15195 856 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 BRINP1O60477 761 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 EIF5BO60841 1220 aaKnown RBP11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 WNT1P04628 370 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 FAM200BP0CF97 657 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 C7P10643 843 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 CHKAP35790 457 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 TXLNAP40222 546 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 EFEMP1Q12805 493 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 NCOA4Q13772 614 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 BMT2Q1RMZ1 405 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 FAM173BQ6P4H8 233 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 SPACA3Q8IXA5 215 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 NELFCDQ8IXH7 590 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 ZC3H3Q8IXZ2 948 aaKnown RBP11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 EID2Q8N6I1 236 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 PDILTQ8N807 584 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 SAP25Q8TEE9 199 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 BAP1Q92560 729 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 FGF11Q92914 225 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 TWNKQ96RR1 684 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 ELF4Q99607 663 aaPredicted RBP11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 BTBD1Q9H0C5 482 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 TMEM245Q9H330 911 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 EBF2Q9HAK2 575 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 PRSS16Q9NQE7 514 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 RASAL2Q9UJF2 1139 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 SMC3Q9UQE7 1217 aa11.4□□□□□ -0.58
SMARCC1-205ENST00000483847 COL6A6A6NMZ7 2263 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 SPTA1P02549 2419 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 LRRIQ3A6PVS8 624 aaPredicted RBP11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 WNT9AO14904 365 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 EIF3DO15371 548 aaKnown RBP eCLIP11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 C4BPAP04003 597 aaKnown RBP11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 HLA-FP30511 346 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 KIF11P52732 1056 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 BCAT1P54687 386 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 C21orf59P57076 290 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 CEBPZQ03701 1054 aaKnown RBP11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 ARID5AQ03989 594 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 FNDC3BQ53EP0 1204 aaKnown RBP11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 KIAA0895LQ68EN5 471 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 CCDC186Q7Z3E2 898 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 ERICH1Q86X53 443 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 ZNF276Q8N554 614 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 DDI1Q8WTU0 396 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 TSC1Q92574 1164 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 TMEM176AQ96HP8 235 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 HNRNPABQ99729 332 aaKnown RBP11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 ACE2Q9BYF1 805 aaPredicted RBP11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 SLC2A11Q9BYW1 496 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 SEMA4CQ9C0C4 833 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 MTG2Q9H4K7 406 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 PIEZO2Q9H5I5 2752 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 ZNF510Q9Y2H8 683 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 PCDHA5Q9Y5H7 936 aa11.39□□□□□ -0.59
SMARCC1-205ENST00000483847 FAM47DPA6NHR8 397 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 TIMM44O43615 452 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 DFNA5O60443 496 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 DNTTP04053 509 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 CYBBP04839 570 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 ITGAVP06756 1048 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 C1SP09871 688 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 ABCB4P21439 1286 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 HOXD9P28356 352 aaPredicted RBP11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 ASPAP45381 313 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 PSEN1P49768 467 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 RACK1P63244 317 aaKnown RBP11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 DLG4P78352 724 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 COG7P83436 770 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 TAF1BQ53T94 588 aaPredicted RBP11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 FAM26FQ5R3K3 315 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 SPOPLQ6IQ16 392 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 ADIPOR2Q86V24 386 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 FMNL3Q8IVF7 1028 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 CPXM2Q8N436 756 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 PARD3BQ8TEW8 1205 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 CYFIP2Q96F07 1278 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 DCLK3Q9C098 648 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 SGK2Q9HBY8 427 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 CLIC5Q9NZA1 410 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 SERGEFQ9UGK8 458 aa11.38□□□□□ -0.59
SMARCC1-205ENST00000483847 A0A1W2PPC4 97 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 VPS37CA5D8V6 355 aaPredicted RBP11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 ERVH48-1M5A8F1 160 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 EXOC3O60645 756 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 KIF20AO95235 890 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 RALAP11233 206 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 CDK4P11802 303 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 EPHA8P29322 1005 aaPredicted RBP11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 GALCP54803 685 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 CLDN10P78369 228 aa11.37□□□□□ -0.59
SMARCC1-205ENST00000483847 ZBTB16Q05516 673 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms