RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 TKTL2Q9H0I9 626 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 OSER1Q9NX31 292 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 SHOC2Q9UQ13 582 aa14.54□□□□□ -0.08
CLK3-204ENST00000483723 PTPRSQ13332 1948 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 BRCA2P51587 3418 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 EEF2KO00418 725 aaKnown RBP14.53□□□□□ -0.08
CLK3-204ENST00000483723 ADAM12O43184 909 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 RIPK2O43353 540 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 RNF40O75150 1001 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 SOD2P04179 222 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 YWHAQP27348 245 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 RBL1P28749 1068 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 ARPP19P56211 112 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 RPL10AP62906 217 aaKnown RBP14.53□□□□□ -0.08
CLK3-204ENST00000483723 ZNF844Q08AG5 666 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 PPP2R5DQ14738 602 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 PSMD5Q16401 504 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 SLC45A4Q5BKX6 768 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 DENND5BQ6ZUT9 1274 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 HOOK3Q86VS8 718 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 CDKL3Q8IVW4 592 aaPredicted RBP14.53□□□□□ -0.08
CLK3-204ENST00000483723 NAT8LQ8N9F0 302 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 CPT1BQ92523 772 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 PRCCQ92733 491 aaPredicted RBP14.53□□□□□ -0.08
CLK3-204ENST00000483723 CASP10Q92851 521 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 ARL8AQ96BM9 186 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 ZBTB9Q96C00 473 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 ZNF558Q96NG5 402 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 HAPLN3Q96S86 360 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 PHACTR1Q9C0D0 580 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 TMBIM4Q9HC24 238 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 IL23AQ9NPF7 189 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 CLIC5Q9NZA1 410 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 HSFX1Q9UBD0 423 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 SLC27A5Q9Y2P5 690 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 RAD54BQ9Y620 910 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 CDY1Q9Y6F8 540 aa14.53□□□□□ -0.08
CLK3-204ENST00000483723 WDR27A2RRH5 827 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 KCNU1A8MYU2 1149 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 LAG3P18627 525 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 PSEN1P49768 467 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 DSG1Q02413 1049 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 IFRD2Q12894 506 aaPredicted RBP14.52□□□□□ -0.08
CLK3-204ENST00000483723 DUSP4Q13115 394 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 SLC29A2Q14542 456 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 ARTNQ5T4W7 220 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 C4orf22Q6V702 233 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 PPIL6Q8IXY8 311 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 SLC39A13Q96H72 371 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 QKIQ96PU8 341 aaKnown RBP eCLIP14.52□□□□□ -0.08
CLK3-204ENST00000483723 CLSTN3Q9BQT9 956 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 HERC2P3Q9BVR0 1158 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 CDC42EP4Q9H3Q1 356 aaKnown RBP14.52□□□□□ -0.08
CLK3-204ENST00000483723 PRDM5Q9NQX1 630 aaPredicted RBP14.52□□□□□ -0.08
CLK3-204ENST00000483723 PAK5Q9P286 719 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 MFHAS1Q9Y4C4 1052 aa14.52□□□□□ -0.08
CLK3-204ENST00000483723 C5orf60A6NFR6 353 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 POLR3GO15318 223 aaPredicted RBP14.52□□□□□ -0.09
CLK3-204ENST00000483723 KCNN4O15554 427 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 CREB3O43889 395 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 GCATO75600 419 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 ABLIM3O94929 683 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 TTC4O95801 387 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 ZDHHC11BP0C7U3 371 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 ERCC2P18074 760 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 MGAT5BQ3V5L5 792 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 TTMPQ5BVD1 217 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 CEP85LQ5SZL2 805 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 B4GALNT4Q76KP1 1039 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 C16orf59Q7L2K0 433 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 GPR65Q8IYL9 337 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 ZNF276Q8N554 614 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 COLGALT1Q8NBJ5 622 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 OR2W6PQ8NHA6 318 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 PWWP2AQ96N64 755 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 TTLL2Q9BWV7 592 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 GMIPQ9P107 970 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 OR12D3Q9UGF7 316 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 SFMBT1Q9UHJ3 866 aa14.52□□□□□ -0.09
CLK3-204ENST00000483723 MRPL42Q9Y6G3 142 aaKnown RBP14.52□□□□□ -0.09
CLK3-204ENST00000483723 ALOX15BO15296 676 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 MFSD11O43934 449 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 SOAT2O75908 522 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 ACRP10323 421 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 CCR1P32246 355 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 HTR7P34969 479 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 OR1D2P34982 312 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 MAGEA6P43360 314 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 TUFMP49411 452 aaKnown RBP14.51□□□□□ -0.09
CLK3-204ENST00000483723 NRLP54845 237 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 TPI1P60174 286 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 NRG1Q02297 640 aaPredicted RBP14.51□□□□□ -0.09
CLK3-204ENST00000483723 BTG3Q14201 252 aaPredicted RBP14.51□□□□□ -0.09
CLK3-204ENST00000483723 UBAP2Q5T6F2 1119 aaKnown RBP14.51□□□□□ -0.09
CLK3-204ENST00000483723 DENND2CQ68D51 928 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 TMCO2Q7Z6W1 182 aaPredicted RBP14.51□□□□□ -0.09
CLK3-204ENST00000483723 DDX53Q86TM3 631 aaKnown RBP14.51□□□□□ -0.09
CLK3-204ENST00000483723 CCDC25Q86WR0 208 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 GOLGA6L1Q8N7Z2 621 aa14.51□□□□□ -0.09
CLK3-204ENST00000483723 STKLD1Q8NE28 680 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms