RNA–Protein interactions for RNA: ENST00000483656.5

HDAC6-226, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-226ENST00000483656 APOL1O14791 398 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TLR5O60602 858 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 PAGE1O75459 146 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 IGLV3-27P01718 113 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 APOC2P02655 101 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 F11P03951 625 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TUBBP07437 444 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 KLRC2P26717 231 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TNFRSF8P28908 595 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 GGCXP38435 758 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 CARSP49589 748 aaKnown RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 CLCN4P51793 760 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 CLCN6P51797 869 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 EPHB3P54753 998 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 VCPP55072 806 aaKnown RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TBX4P57082 545 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 SLC10A2Q12908 348 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 PLD1Q13393 1074 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 BRD3Q15059 726 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 NOMO1Q15155 1222 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TRIP4Q15650 581 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 ARL13BQ3SXY8 428 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 C10orf120Q5SQS8 335 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 DUPD1Q68J44 220 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 NCBP2-AS2Q69YL0 99 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 CCDC70Q6NSX1 233 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 C1orf228Q6PIY5 440 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 DDX42Q86XP3 938 aaKnown RBP eCLIP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 CCDC105Q8IYK2 499 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TTC13Q8NBP0 860 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 KREMEN2Q8NCW0 462 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 PDZD8Q8NEN9 1154 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 SLC22A17Q8WUG5 538 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 RUBCNQ92622 972 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 RUNDC3BQ96NL0 473 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 SAMD11Q96NU1 681 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 SERPINB11Q96P15 392 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TGS1Q96RS0 853 aaKnown RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 HAPLN3Q96S86 360 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 ERP44Q9BS26 406 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 MAK16Q9BXY0 300 aaKnown RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 PBX4Q9BYU1 374 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 FRMD8P1Q9BZ68 369 aaPredicted RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 C10orf88Q9H8K7 445 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 ARHGEF4Q9NR80 690 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 OLA1Q9NTK5 396 aaKnown RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 MARCH2Q9P0N8 246 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 XPO7Q9UIA9 1087 aaKnown RBP10.46□□□□□ -0.73
HDAC6-226ENST00000483656 RASAL2Q9UJF2 1139 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 NEU3Q9UQ49 428 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 TLR6Q9Y2C9 796 aa10.46□□□□□ -0.73
HDAC6-226ENST00000483656 SLC12A8A0AV02 714 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 H0YGN5 161 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 H3BNC9 293 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 DCLK1O15075 740 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 DAPK3O43293 454 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 CREB3O43889 395 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 CLASP2O75122 1294 aaKnown RBP10.45□□□□□ -0.74
HDAC6-226ENST00000483656 ECEL1O95672 775 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 GLUD1P00367 558 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 C8AP07357 584 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 TGM2P21980 687 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 IVDP26440 423 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 ECHS1P30084 290 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 CCR1P32246 355 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 ARL4AP40617 200 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 HCAR3P49019 387 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 GBE1Q04446 702 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 NNTQ13423 1086 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 GPM6BQ13491 265 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 PTK6Q13882 451 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 BYSLQ13895 437 aaKnown RBP10.45□□□□□ -0.74
HDAC6-226ENST00000483656 VEPH1Q14D04 833 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 MANEALQ5VSG8 457 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 RFX8Q6ZV50 586 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 B4GALNT4Q76KP1 1039 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 C14orf80Q86SX3 495 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 PRUNE1Q86TP1 453 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 TMC8Q8IU68 726 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 IFT20Q8IY31 132 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 GSPT2Q8IYD1 628 aaKnown RBP10.45□□□□□ -0.74
HDAC6-226ENST00000483656 ZNF683Q8IZ20 524 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 HS6ST3Q8IZP7 471 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 ALLCQ8N6M5 410 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 GLIS1Q8NBF1 620 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 RNF34Q969K3 372 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 ZNF512Q96ME7 567 aaPredicted RBP10.45□□□□□ -0.74
HDAC6-226ENST00000483656 RNF38Q9H0F5 515 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 NEUROG2Q9H2A3 272 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 NKX2-4Q9H2Z4 354 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 CERS4Q9HA82 394 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 GRHL1Q9NZI5 618 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 TRPM5Q9NZQ8 1165 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 OR12D3Q9UGF7 316 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 ASB3Q9Y575 518 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 HS3ST4Q9Y661 456 aa10.45□□□□□ -0.74
HDAC6-226ENST00000483656 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-226ENST00000483656 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.44□□□□□ -0.74
HDAC6-226ENST00000483656 CCDC151A5D8V7 595 aa10.44□□□□□ -0.74
HDAC6-226ENST00000483656 C2orf78A6NCI8 922 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms