RNA–Protein interactions for RNA: ENST00000483631.1

HPS4-213, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 737 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-213ENST00000483631 GABBR2O75899 941 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 IGLV3-27P01718 113 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 LTFP02788 710 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 BRD2P25440 801 aaKnown RBP20.7■□□□□ 0.9
HPS4-213ENST00000483631 HOXD9P28356 352 aaPredicted RBP20.7■□□□□ 0.9
HPS4-213ENST00000483631 ACADSBP45954 432 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 RPL6Q02878 288 aaKnown RBP20.7■□□□□ 0.9
HPS4-213ENST00000483631 NNTQ13423 1086 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 MPP7Q5T2T1 576 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 BEND5Q7L4P6 421 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 ARHGEF19Q8IW93 802 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 FRMD1Q8N878 549 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 ZNF557Q8N988 423 aaPredicted RBP20.7■□□□□ 0.9
HPS4-213ENST00000483631 WFIKKN2Q8TEU8 576 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 STK32AQ8WU08 396 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 TRIM62Q9BVG3 475 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 INTS2Q9H0H0 1204 aaKnown RBP20.7■□□□□ 0.9
HPS4-213ENST00000483631 SFMBT1Q9UHJ3 866 aa20.7■□□□□ 0.9
HPS4-213ENST00000483631 LAMA1P25391 3075 aa20.69■□□□□ 0.9
HPS4-213ENST00000483631 C4orf47A7E2U8 309 aa20.69■□□□□ 0.9
HPS4-213ENST00000483631 IRAK2O43187 625 aa20.69■□□□□ 0.9
HPS4-213ENST00000483631 RGS7P49802 495 aa20.69■□□□□ 0.9
HPS4-213ENST00000483631 IRX4P78413 519 aa20.69■□□□□ 0.9
HPS4-213ENST00000483631 TRIM61Q5EBN2 209 aa20.69■□□□□ 0.9
HPS4-213ENST00000483631 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.69■□□□□ 0.9
HPS4-213ENST00000483631 TMA16Q96EY4 203 aaKnown RBP20.69■□□□□ 0.9
HPS4-213ENST00000483631 PATE3B3GLJ2 98 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 CDX4O14627 284 aaPredicted RBP20.68■□□□□ 0.9
HPS4-213ENST00000483631 MED7O43513 233 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 KCNK5O95279 499 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 C7P10643 843 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 IL12RB1P42701 662 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 GPD2P43304 727 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 ZNF33AQ06730 810 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 DUOXA1Q1HG43 343 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 FOXJ1Q92949 421 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 TMEM74BQ9NUR3 256 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 CLEC4EQ9ULY5 219 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 NFE2L3Q9Y4A8 694 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 RAD54BQ9Y620 910 aa20.68■□□□□ 0.9
HPS4-213ENST00000483631 EPG5Q9HCE0 2579 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 GTPBP10A4D1E9 387 aaKnown RBP20.67■□□□□ 0.9
HPS4-213ENST00000483631 PCNX2A6NKB5 2137 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 WASH3PC4AMC7 463 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 SYNCRIPO60506 623 aaKnown RBP20.67■□□□□ 0.9
HPS4-213ENST00000483631 CSRP1P21291 193 aaKnown RBP20.67■□□□□ 0.9
HPS4-213ENST00000483631 ITPKAP23677 461 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 SLC11A2P49281 568 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 ZNF234Q14588 700 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 FUT11Q495W5 492 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 ARMCX6Q7L4S7 300 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 KIAA0907Q7Z7F0 614 aaPredicted RBP20.67■□□□□ 0.9
HPS4-213ENST00000483631 ZNF419Q96HQ0 510 aaPredicted RBP20.67■□□□□ 0.9
HPS4-213ENST00000483631 SERPINB11Q96P15 392 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 DDX50Q9BQ39 737 aaKnown RBP20.67■□□□□ 0.9
HPS4-213ENST00000483631 PRDM16Q9HAZ2 1276 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 USP36Q9P275 1121 aaKnown RBP20.67■□□□□ 0.9
HPS4-213ENST00000483631 SLC6A14Q9UN76 642 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 CYP8B1Q9UNU6 501 aa20.67■□□□□ 0.9
HPS4-213ENST00000483631 MSI1O43347 362 aaKnown RBP20.66■□□□□ 0.9
HPS4-213ENST00000483631 NCAM1P13591 858 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 PRKCSHP14314 528 aaPredicted RBP20.66■□□□□ 0.9
HPS4-213ENST00000483631 PMLP29590 882 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 HLA-FP30511 346 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 TBX4P57082 545 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 MLKLQ8NB16 471 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 SLC4A5Q9BY07 1137 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 CIPCQ9C0C6 399 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 FBRSQ9HAH7 460 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 UBE2TQ9NPD8 197 aaPredicted RBP20.66■□□□□ 0.9
HPS4-213ENST00000483631 ITM2CQ9NQX7 267 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 CHMP5Q9NZZ3 219 aa20.66■□□□□ 0.9
HPS4-213ENST00000483631 CHD8Q9HCK8 2581 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 CACNA1BQ00975 2339 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 ACSL4O60488 711 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 NDUFS2O75306 463 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 IGLV3-19P01714 112 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 SERPINF2P08697 491 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 KRT5P13647 590 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 CD6P30203 668 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 OXTRP30559 389 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 SHC2P98077 582 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 ARID5AQ03989 594 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 N4BP2L1Q5TBK1 243 aaPredicted RBP20.65■□□□□ 0.9
HPS4-213ENST00000483631 PIK3R6Q5UE93 754 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 TMEM215Q68D42 235 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 TRIM65Q6PJ69 517 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 KIAA1324Q6UXG2 1013 aaKnown RBP20.65■□□□□ 0.9
HPS4-213ENST00000483631 TMEM110Q86TL2 294 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 AHI1Q8N157 1196 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 ZNF606Q8WXB4 792 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 MKRN2Q9H000 416 aaKnown RBP20.65■□□□□ 0.9
HPS4-213ENST00000483631 CAPN10Q9HC96 672 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 SUSD2Q9UGT4 822 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 TLR6Q9Y2C9 796 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 PCDH15Q96QU1 1955 aa20.65■□□□□ 0.9
HPS4-213ENST00000483631 MUC22E2RYF6 1773 aaPredicted RBP20.64■□□□□ 0.9
HPS4-213ENST00000483631 UPK3BL1B0FP48 263 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 UPK3BL2E5RIL1 263 aa20.64■□□□□ 0.89
HPS4-213ENST00000483631 FYNP06241 537 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms