RNA–Protein interactions for RNA: ENST00000483546.1

RPP40-206, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 3

Gene RPP40, Length 654 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-206ENST00000483546 ARID5BQ14865 1188 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 SLC25A52Q3SY17 297 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 TDRD12Q587J7 1177 aaKnown RBP16.22■□□□□ 0.19
RPP40-206ENST00000483546 MPP7Q5T2T1 576 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 ACBD5Q5T8D3 534 aaPredicted RBP16.22■□□□□ 0.19
RPP40-206ENST00000483546 HGSNATQ68CP4 663 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 FSTL4Q6MZW2 842 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 SND1Q7KZF4 910 aaKnown RBP eCLIP16.22■□□□□ 0.19
RPP40-206ENST00000483546 ATP6V0D2Q8N8Y2 350 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 ZNF557Q8N988 423 aaPredicted RBP16.22■□□□□ 0.19
RPP40-206ENST00000483546 OR8K1Q8NGG5 319 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 ADAM32Q8TC27 787 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 TRIM11Q96F44 468 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 BTN2A3PQ96KV6 586 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 SLC2A11Q9BYW1 496 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 RBSNQ9H1K0 784 aa16.22■□□□□ 0.19
RPP40-206ENST00000483546 TYW5A2RUC4 315 aaKnown RBP16.21■□□□□ 0.19
RPP40-206ENST00000483546 ANKRD62A6NC57 917 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 NEDD8-MDP1E9PL57 170 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 M0QYT0 321 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 GFRA2O00451 464 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 ATG13O75143 517 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 TULP3O75386 442 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 KRT3P12035 628 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 ABCB4P21439 1286 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 GRIA2P42262 883 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 RNASE9P60153 205 aaKnown RBP16.21■□□□□ 0.19
RPP40-206ENST00000483546 TSR1Q2NL82 804 aaKnown RBP16.21■□□□□ 0.19
RPP40-206ENST00000483546 C2CD6Q53TS8 623 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 BRMS1LQ5PSV4 323 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 FYB2Q5VWT5 728 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 TPGS1Q6ZTW0 290 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 CNGA4Q8IV77 575 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 MCOLN2Q8IZK6 566 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 OLIG1Q8TAK6 271 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 KCNV2Q8TDN2 545 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 DNAJC7Q99615 494 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 SELENOOQ9BVL4 669 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 ARHGEF4Q9NR80 690 aa16.21■□□□□ 0.19
RPP40-206ENST00000483546 METTL5Q9NRN9 209 aaKnown RBP16.21■□□□□ 0.19
RPP40-206ENST00000483546 ZNHIT6Q9NWK9 470 aaKnown RBP16.21■□□□□ 0.19
RPP40-206ENST00000483546 SIGLEC16A6NMB1 481 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 KCNU1A8MYU2 1149 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 DDX3XO00571 662 aaKnown RBP eCLIP16.2■□□□□ 0.18
RPP40-206ENST00000483546 RTN2O75298 545 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 KAT7O95251 611 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 MYBL1P10243 752 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 SKILP12757 684 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 DESP17661 470 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 SDC4P31431 198 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 FLT3P36888 993 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 PTPN9P43378 593 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 TNFRSF4P43489 277 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 SULT1E1P49888 294 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 E2F5Q15329 346 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 HSF5Q4G112 596 aaPredicted RBP16.2■□□□□ 0.18
RPP40-206ENST00000483546 ZC3H12AQ5D1E8 599 aaKnown RBP16.2■□□□□ 0.18
RPP40-206ENST00000483546 GRAMD4Q6IC98 578 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 DNAJC24Q6P3W2 148 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 C1orf210Q8IVY1 113 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 PHTF2Q8N3S3 785 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 SPEM1Q8N4L4 309 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 DDI1Q8WTU0 396 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 RNF34Q969K3 372 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 TMA16Q96EY4 203 aaKnown RBP16.2■□□□□ 0.18
RPP40-206ENST00000483546 MRFAP1L1Q96HT8 127 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 DNAJC17Q9NVM6 304 aaKnown RBP16.2■□□□□ 0.18
RPP40-206ENST00000483546 FBXO10Q9UK96 956 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 SLC27A6Q9Y2P4 619 aa16.2■□□□□ 0.18
RPP40-206ENST00000483546 TCRBV5S1A1TA0A578 114 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 C2CD4BA6NLJ0 364 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 CHURC1-FNTBB4DL54 471 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 ENDOD1O94919 500 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 EGFP01133 1207 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 DGKGP49619 791 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 CXCR3P49682 368 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 CCR3P51677 355 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 PITX1P78337 314 aaPredicted RBP16.19■□□□□ 0.18
RPP40-206ENST00000483546 DEUP1Q05D60 604 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 NME3Q13232 169 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 FAM133BQ5BKY9 247 aaKnown RBP16.19■□□□□ 0.18
RPP40-206ENST00000483546 PIK3R6Q5UE93 754 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 RNF43Q68DV7 783 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 STRADAQ7RTN6 431 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 BNIPLQ7Z465 357 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 C12orf40Q86WS4 652 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 GAS2L3Q86XJ1 694 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 TERB1Q8NA31 727 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 HJURPQ8NCD3 748 aaPredicted RBP16.19■□□□□ 0.18
RPP40-206ENST00000483546 ACDQ96AP0 544 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 ISCUQ9H1K1 167 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 FBRSL1Q9HCM7 1045 aaKnown RBP16.19■□□□□ 0.18
RPP40-206ENST00000483546 PARVAQ9NVD7 372 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 SPATA6Q9NWH7 488 aaPredicted RBP16.19■□□□□ 0.18
RPP40-206ENST00000483546 FBXO4Q9UKT5 387 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 CACNA1IQ9P0X4 2223 aa16.19■□□□□ 0.18
RPP40-206ENST00000483546 SSU72P8A0A1W2PR75 194 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 LAMTOR5O43504 91 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 MFAP3LO75121 409 aa16.18■□□□□ 0.18
RPP40-206ENST00000483546 PAPSS2O95340 614 aaPredicted RBP16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms