RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 NRLP54845 237 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 PITX1P78337 314 aaPredicted RBP18.72■□□□□ 0.59
HDAC6-225ENST00000483506 CDK17Q00537 523 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 CENPCQ03188 943 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 MPPE1Q53F39 396 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 FAM133BQ5BKY9 247 aaKnown RBP18.72■□□□□ 0.59
HDAC6-225ENST00000483506 TSSK4Q6SA08 328 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 LRSAM1Q6UWE0 723 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 ADAM32Q8TC27 787 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 CPA5Q8WXQ8 436 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 NT5C3BQ969T7 300 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 PCDHB18PQ96TA0 734 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 SYT11Q9BT88 431 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 RRN3Q9NYV6 651 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 USP34Q70CQ2 3546 aa18.72■□□□□ 0.59
HDAC6-225ENST00000483506 TRIM24O15164 1050 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 GRAP2O75791 330 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 NOS2P35228 1153 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 MATKP42679 507 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 DGKGP49619 791 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 GSCP56915 257 aaPredicted RBP18.71■□□□□ 0.59
HDAC6-225ENST00000483506 MPP7Q5T2T1 576 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 NADSYN1Q6IA69 706 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 NUDT18Q6ZVK8 323 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 IRF2BP2Q7Z5L9 587 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 SLC2A11Q9BYW1 496 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 PLK2Q9NYY3 685 aa18.71■□□□□ 0.59
HDAC6-225ENST00000483506 MYO18AQ92614 2054 aaKnown RBP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 ZFHX2Q9C0A1 2572 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 CCDC163A0A0D9SF12 145 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 TBC1D3BA6NDS4 549 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 ANTXRLA6NF34 631 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 LRRC53A6NM62 1247 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 KCNU1A8MYU2 1149 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 SLC2A3P11169 496 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 HOXD9P28356 352 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 SLC6A4P31645 630 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 GBP1P32455 592 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 UBASH3AP57075 661 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 PTP4A2Q12974 167 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 CLEC16AQ2KHT3 1053 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 PIK3R6Q5UE93 754 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 OTUD1Q5VV17 481 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 PHF13Q86YI8 300 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 CAMKK1Q8N5S9 505 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 IL17RCQ8NAC3 791 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 OLIG1Q8TAK6 271 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 DDI1Q8WTU0 396 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 BHMTQ93088 406 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 PGAP3Q96FM1 320 aaPredicted RBP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 NPY6RQ99463 290 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 AGPAT1Q99943 283 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 DDX50Q9BQ39 737 aaKnown RBP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 TSPY26PQ9H489 355 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 FAM204AQ9H8W3 233 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 TMEM51Q9NW97 253 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 SLTMQ9NWH9 1034 aaKnown RBP eCLIP18.7■□□□□ 0.58
HDAC6-225ENST00000483506 AIPL1Q9NZN9 384 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 TMEM59LQ9UK28 342 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 HCN2Q9UL51 889 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 MMP17Q9ULZ9 603 aa18.7■□□□□ 0.58
HDAC6-225ENST00000483506 A0A1W2PQJ5 194 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 APOEP02649 317 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 PRKCIP41743 596 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 SEC13P55735 322 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 ARID5AQ03989 594 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 MTA1Q13330 715 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 DMC1Q14565 340 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 C2orf27AQ580R0 203 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 ZC3H12AQ5D1E8 599 aaKnown RBP18.69■□□□□ 0.58
HDAC6-225ENST00000483506 C10orf76Q5T2E6 689 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 FAM102AQ5T9C2 384 aaPredicted RBP18.69■□□□□ 0.58
HDAC6-225ENST00000483506 MMS22LQ6ZRQ5 1243 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 BNIPLQ7Z465 357 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 IQCDQ96DY2 449 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 TMA16Q96EY4 203 aaKnown RBP18.69■□□□□ 0.58
HDAC6-225ENST00000483506 BTN2A3PQ96KV6 586 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 NUP58Q9BVL2 599 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 DDIT4Q9NX09 232 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP18.69■□□□□ 0.58
HDAC6-225ENST00000483506 SLC8A2Q9UPR5 921 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 R4GN57 208 aa18.69■□□□□ 0.58
HDAC6-225ENST00000483506 PRRT4C9JH25 899 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 CCR1P32246 355 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 NSFP46459 744 aaKnown RBP18.68■□□□□ 0.58
HDAC6-225ENST00000483506 SGSHP51688 502 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 C2CD6Q53TS8 623 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 ANKS1BQ7Z6G8 1248 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 WDR5BQ86VZ2 330 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 LONP2Q86WA8 852 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 ALLCQ8N6M5 410 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 DDX51Q8N8A6 666 aaKnown RBP eCLIP18.68■□□□□ 0.58
HDAC6-225ENST00000483506 SLC30A5Q8TAD4 765 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 ATRIPQ8WXE1 791 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 PRICKLE1Q96MT3 831 aaPredicted RBP18.68■□□□□ 0.58
HDAC6-225ENST00000483506 ADAM33Q9BZ11 813 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 CALCOCO1Q9P1Z2 691 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 EBF1Q9UH73 591 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 CLEC4EQ9ULY5 219 aa18.68■□□□□ 0.58
HDAC6-225ENST00000483506 STAP1Q9ULZ2 295 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms