RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 NPY6RQ99463 290 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 VPS37BQ9H9H4 285 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 KIF9Q9HAQ2 790 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 PIH1D1Q9NWS0 290 aaKnown RBP14.95□□□□□ -0.02
CHD3-211ENST00000481999 SENP1Q9P0U3 644 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 CHD7Q9P2D1 2997 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 PRKAG3Q9UGI9 489 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 XPO7Q9UIA9 1087 aaKnown RBP14.95□□□□□ -0.02
CHD3-211ENST00000481999 POC1B-GALNT4F8VUJ3 575 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 HOXD10P28358 340 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 SLC8A1P32418 973 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 RPL9P32969 192 aaKnown RBP14.95□□□□□ -0.02
CHD3-211ENST00000481999 OR1G1P47890 313 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 RAB27AP51159 221 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 ATN1P54259 1190 aaPredicted RBP14.95□□□□□ -0.02
CHD3-211ENST00000481999 GPX6P59796 221 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 KCNT2Q6UVM3 1135 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 CENPUQ71F23 418 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 PGLYRP2Q96PD5 576 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 ZNF670Q9BS34 389 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 UNC93B1Q9H1C4 597 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 POPDC2Q9HBU9 364 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 RAB6BQ9NRW1 208 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 DTLQ9NZJ0 730 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 CDH9Q9ULB4 789 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 FZD10Q9ULW2 581 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 TRIM17Q9Y577 477 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 USP3Q9Y6I4 520 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 CLUHO75153 1309 aa14.95□□□□□ -0.02
CHD3-211ENST00000481999 ALOX15BO15296 676 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 MFSD11O43934 449 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 GPR15P49685 360 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 SLC18A1P54219 525 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 SNX16P57768 344 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 DEUP1Q05D60 604 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 TFDP2Q14188 446 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 BBS9Q3SYG4 887 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 PREPLQ4J6C6 727 aaPredicted RBP14.94□□□□□ -0.02
CHD3-211ENST00000481999 INTS6LQ5JSJ4 861 aaKnown RBP14.94□□□□□ -0.02
CHD3-211ENST00000481999 FAM26DQ5JW98 314 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 TTC9BQ8N6N2 239 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 DBF4BQ8NFT6 615 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 GPR152Q8TDT2 470 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 KCTD13Q8WZ19 329 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 RXFP1Q9HBX9 757 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 KLHL14Q9P2G3 628 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 NT5C1B-RDH14C9J2C7 533 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 DAB1O75553 588 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 TAC1P20366 129 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 GRIA1P42261 906 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 NCALDP61601 193 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 BNIP1Q12981 228 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 RIPK1Q13546 671 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 TBC1D1Q86TI0 1168 aaPredicted RBP14.94□□□□□ -0.02
CHD3-211ENST00000481999 PPIL6Q8IXY8 311 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 NT5C3BQ969T7 300 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 FAF2Q96CS3 445 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 SMARCD1Q96GM5 515 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 SCLYQ96I15 445 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 FRMD8P1Q9BZ68 369 aaPredicted RBP14.94□□□□□ -0.02
CHD3-211ENST00000481999 YY1AP1Q9H869 796 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 ECT2Q9H8V3 914 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 ARHGEF4Q9NR80 690 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 RGS18Q9NS28 235 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 TBC1D13Q9NVG8 400 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 SMG5Q9UPR3 1016 aaKnown RBP14.94□□□□□ -0.02
CHD3-211ENST00000481999 CHMP2BQ9UQN3 213 aa14.94□□□□□ -0.02
CHD3-211ENST00000481999 SCN5AQ14524 2016 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 MOXD2PA6NHM9 499 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PRPF4O43172 522 aaKnown RBP eCLIP14.93□□□□□ -0.02
CHD3-211ENST00000481999 SOAT2O75908 522 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 METTL18O95568 372 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 ATP6V1G2O95670 118 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 ZBED1O96006 694 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 VAV1P15498 845 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 NOS2P35228 1153 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 RASA2Q15283 850 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 WLSQ5T9L3 541 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 SLC24A5Q71RS6 500 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 STRADAQ7RTN6 431 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PCGF5Q86SE9 256 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 FBXO36Q8NEA4 188 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PXYLP1Q8TE99 480 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PKMYT1Q99640 499 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 TACO1Q9BSH4 297 aaKnown RBP14.93□□□□□ -0.02
CHD3-211ENST00000481999 WDR6Q9NNW5 1121 aaKnown RBP14.93□□□□□ -0.02
CHD3-211ENST00000481999 DDIT4Q9NX09 232 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 GGT7Q9UJ14 662 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 M0QZQ0 153 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PQBP1O60828 265 aaKnown RBP14.93□□□□□ -0.02
CHD3-211ENST00000481999 APRTP07741 180 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 PCSK1P29120 753 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 WDR4P57081 412 aaKnown RBP14.93□□□□□ -0.02
CHD3-211ENST00000481999 RNASELQ05823 741 aaKnown RBP14.93□□□□□ -0.02
CHD3-211ENST00000481999 SMAD1Q15797 465 aaKnown RBP14.93□□□□□ -0.02
CHD3-211ENST00000481999 RAB41Q5JT25 222 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 RNF43Q68DV7 783 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 FAM171BQ6P995 826 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 GLB1LQ6UWU2 654 aa14.93□□□□□ -0.02
CHD3-211ENST00000481999 CEP57Q86XR8 500 aa14.93□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms