RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 ENGP17813 658 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 HOXD9P28356 352 aaPredicted RBP19.36■□□□□ 0.69
CLK1-211ENST00000481641 SGSHP51688 502 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 ZNF132P52740 706 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 ZNF234Q14588 700 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 MPPE1Q53F39 396 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 SH3PXD2AQ5TCZ1 1133 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 SCML4Q8N228 414 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 TRIML1Q8N9V2 468 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 UCMAQ8WVF2 138 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 MKRN2Q9H000 416 aaKnown RBP19.36■□□□□ 0.69
CLK1-211ENST00000481641 MIS12Q9H081 205 aa19.36■□□□□ 0.69
CLK1-211ENST00000481641 INTS2Q9H0H0 1204 aaKnown RBP19.36■□□□□ 0.69
CLK1-211ENST00000481641 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.36■□□□□ 0.69
CLK1-211ENST00000481641 AFPP02771 609 aaKnown RBP19.35■□□□□ 0.69
CLK1-211ENST00000481641 PRKCHP24723 683 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 PMLP29590 882 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 GCNT1Q02742 428 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 ENPP2Q13822 863 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 STARD3Q14849 445 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 CAMK4Q16566 473 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 PEAR1Q5VY43 1037 aaPredicted RBP19.35■□□□□ 0.69
CLK1-211ENST00000481641 RFWD3Q6PCD5 774 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 SLC23A3Q6PIS1 610 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 FOXR2Q6PJQ5 311 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 HSPA12BQ96MM6 686 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 SLC2A11Q9BYW1 496 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 PRDM16Q9HAZ2 1276 aa19.35■□□□□ 0.69
CLK1-211ENST00000481641 MAP1BP46821 2468 aaKnown RBP19.34■□□□□ 0.69
CLK1-211ENST00000481641 NDUFS2O75306 463 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 GNA14O95837 355 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 LTFP02788 710 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 KRT5P13647 590 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 HLA-EP13747 358 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 HLA-FP30511 346 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 MARSP56192 900 aaKnown RBP19.34■□□□□ 0.69
CLK1-211ENST00000481641 LMAN2Q12907 356 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 STILQ15468 1287 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 DUOXA1Q1HG43 343 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 ADGRF1Q5T601 910 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 MSANTD2Q6P1R3 559 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 DENND1BQ6P3S1 775 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 GJB7Q6PEY0 223 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 CACUL1Q86Y37 369 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 CREBRFQ8IUR6 639 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 CYB5D2Q8WUJ1 264 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 IRGQQ8WZA9 623 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 TMA16Q96EY4 203 aaKnown RBP19.34■□□□□ 0.69
CLK1-211ENST00000481641 HSFY1Q96LI6 401 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 GTPBP2Q9BX10 602 aaKnown RBP19.34■□□□□ 0.69
CLK1-211ENST00000481641 UBE2TQ9NPD8 197 aaPredicted RBP19.34■□□□□ 0.69
CLK1-211ENST00000481641 STOML2Q9UJZ1 356 aa19.34■□□□□ 0.69
CLK1-211ENST00000481641 CACNA1BQ00975 2339 aa19.33■□□□□ 0.69
CLK1-211ENST00000481641 KCNJ18B7U540 433 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 SYNCRIPO60506 623 aaKnown RBP19.33■□□□□ 0.68
CLK1-211ENST00000481641 FYNP06241 537 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 EPHX1P07099 455 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 NCAM1P13591 858 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 MAOBP27338 520 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 SLC6A4P31645 630 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 TMPRSS6Q8IU80 811 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 SCUBE3Q8IX30 993 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 RGL4Q8IZJ4 473 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 ZNF366Q8N895 744 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 DEFB124Q8NES8 71 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 OR2I1PQ8NGU4 316 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 WFDC5Q8TCV5 224 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 CRACR2AQ9BSW2 395 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 ACP6Q9NPH0 428 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 ST7Q9NRC1 585 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 ABCB8Q9NUT2 735 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 ANGPTL2Q9UKU9 493 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 SLC6A14Q9UN76 642 aa19.33■□□□□ 0.68
CLK1-211ENST00000481641 CKAP5Q14008 2032 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 NPC1O15118 1278 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 TBL1XO60907 577 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 IGLV3-27P01718 113 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 CD6P30203 668 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 DPP6P42658 865 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 GPD2P43304 727 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 COPAP53621 1224 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 TBX4P57082 545 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 APBA1Q02410 837 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 ARID5AQ03989 594 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 ZNF252P-AS1Q0IIN9 211 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 EIF4HQ15056 248 aaKnown RBP19.32■□□□□ 0.68
CLK1-211ENST00000481641 CHST9Q7L1S5 443 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 CEP76Q8TAP6 659 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 ADAM32Q8TC27 787 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 TOE1Q96GM8 510 aaKnown RBP19.32■□□□□ 0.68
CLK1-211ENST00000481641 ZNF419Q96HQ0 510 aaPredicted RBP19.32■□□□□ 0.68
CLK1-211ENST00000481641 MED15Q96RN5 788 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 CAPN10Q9HC96 672 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 ITM2CQ9NQX7 267 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 USP36Q9P275 1121 aaKnown RBP19.32■□□□□ 0.68
CLK1-211ENST00000481641 CNTN6Q9UQ52 1028 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 NAALADL1Q9UQQ1 740 aa19.32■□□□□ 0.68
CLK1-211ENST00000481641 ACSL4O60488 711 aa19.31■□□□□ 0.68
CLK1-211ENST00000481641 FBXO21O94952 628 aa19.31■□□□□ 0.68
CLK1-211ENST00000481641 LETM1O95202 739 aaPredicted RBP19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms