RNA–Protein interactions for RNA: ENST00000479300.1

VCP-205, Transcript of valosin containing protein, humanhuman

TSL 1 (best)

Gene VCP, Length 559 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-205ENST00000479300 DMAP1Q9NPF5 467 aaPredicted RBP7□□□□□ -1.29
VCP-205ENST00000479300 DMAC2Q9NW81 257 aa7□□□□□ -1.29
VCP-205ENST00000479300 TBC1D14Q9P2M4 693 aa7□□□□□ -1.29
VCP-205ENST00000479300 DKK4Q9UBT3 224 aa7□□□□□ -1.29
VCP-205ENST00000479300 TRAF3IP3Q9Y228 551 aa7□□□□□ -1.29
VCP-205ENST00000479300 HPSEQ9Y251 543 aa7□□□□□ -1.29
VCP-205ENST00000479300 BTBD3Q9Y2F9 522 aa7□□□□□ -1.29
VCP-205ENST00000479300 SH3BP1Q9Y3L3 701 aa7□□□□□ -1.29
VCP-205ENST00000479300 STARD13Q9Y3M8 1113 aa7□□□□□ -1.29
VCP-205ENST00000479300 KNL1Q8NG31 2342 aa7□□□□□ -1.29
VCP-205ENST00000479300 NAV2Q8IVL1 2488 aa7□□□□□ -1.29
VCP-205ENST00000479300 MGAQ8IWI9 3026 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 A0A087WV48 116 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 E2F8A0AVK6 867 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 FAM149AA5PLN7 773 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 TRABD2BA6NFA1 517 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 PALM2-AKAP2B1ALY0 433 aaPredicted RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 KCNJ18B7U540 433 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 ZBTB24O43167 697 aaPredicted RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 ATP8B1O43520 1251 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 HLA-DRAP01903 254 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 C4BPAP04003 597 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 SYPP08247 313 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 FAM200BP0CF97 657 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 EPB41P11171 864 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 TNNT1P13805 278 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 CDC25BP30305 580 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 GTF2H1P32780 548 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 NDST1P52848 882 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 CDH8P55286 799 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 HNRNPH2P55795 449 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 SLC8A3P57103 927 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 UBE2HP62256 183 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 TPM4P67936 248 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 GAD2Q05329 585 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 CYP4F3Q08477 520 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 DPYDQ12882 1025 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 ADAM9Q13443 819 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 ZACNQ401N2 412 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 TCERG1LQ5VWI1 586 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 ICE2Q659A1 982 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 DBX2Q6ZNG2 339 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 PAQR9Q6ZVX9 377 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 TADA2BQ86TJ2 420 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 ACOT1Q86TX2 421 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 FAM35AQ86V20 835 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 GUF1Q8N442 669 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 ZCCHC9Q8N567 271 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 GOLGA6L1Q8N7Z2 621 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 C1orf216Q8TAB5 229 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 SCAMP5Q8TAC9 235 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 TMEM174Q8WUU8 243 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 DNASE2BQ8WZ79 361 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 MYCBPQ99417 103 aaPredicted RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 DUSP9Q99956 384 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 NT5C1AQ9BXI3 368 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 KCTD10Q9H3F6 313 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 SMYD3Q9H7B4 428 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 CYP3A43Q9HB55 503 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 SPHK2Q9NRA0 654 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 KCND1Q9NSA2 647 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 KIAA1522Q9P206 1035 aaPredicted RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 DEC1Q9P2X7 70 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 CHORDC1Q9UHD1 332 aaPredicted RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 LSM7Q9UK45 103 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 MAPK8IP1Q9UQF2 711 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 V9GYY5 206 aaPredicted RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 HECTD1Q9ULT8 2610 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 ATMQ13315 3056 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 PTPRQQ9UMZ3 2332 aa6.99□□□□□ -1.29
VCP-205ENST00000479300 GOLGA4Q13439 2230 aaKnown RBP6.99□□□□□ -1.29
VCP-205ENST00000479300 MUC22E2RYF6 1773 aaPredicted RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 FAM237AA0A1B0GTK4 181 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 ERICH4A6NGS2 130 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 CACNG3O60359 315 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 CILPO75339 1184 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 ZNF217O75362 1048 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 TBX18O95935 607 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 TUBB4AP04350 444 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 CISD3P0C7P0 127 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 ZDHHC11BP0C7U3 371 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 ITPKBP27987 946 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 ADORA2BP29275 332 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 CASQ1P31415 396 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 RDXP35241 583 aaKnown RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 PPP1R2P41236 205 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 GCLMP48507 274 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 GTF2A1P52655 376 aaPredicted RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 CLDN6P56747 220 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 MAP3K7CLP57077 242 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 YWHAEP62258 255 aaKnown RBP6.98□□□□□ -1.29
VCP-205ENST00000479300 DLG4P78352 724 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 CLDN10P78369 228 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 ENPEPQ07075 957 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 GPS2Q13227 327 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 NFIL3Q16649 462 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 ANO4Q32M45 955 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 SNX30Q5VWJ9 437 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 KRT39Q6A163 491 aa6.98□□□□□ -1.29
VCP-205ENST00000479300 SV2AQ7L0J3 742 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms