RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 TAF5Q15542 800 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 ANO4Q32M45 955 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 FYB2Q5VWT5 728 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 SARM1Q6SZW1 724 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 BNIPLQ7Z465 357 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 TAC4Q86UU9 113 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 DRC7Q8IY82 874 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 MAML2Q8IZL2 1156 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-217ENST00000479161 BTN2A3PQ96KV6 586 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 PCDHB18PQ96TA0 734 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 XPO4Q9C0E2 1151 aaKnown RBP16.09■□□□□ 0.17
C9orf3-217ENST00000479161 SPATA6Q9NWH7 488 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-217ENST00000479161 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.09■□□□□ 0.17
C9orf3-217ENST00000479161 SLC12A6Q9UHW9 1150 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 STAP1Q9ULZ2 295 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 PAXBP1Q9Y5B6 917 aa16.09■□□□□ 0.17
C9orf3-217ENST00000479161 KCNU1A8MYU2 1149 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 K7EQS6 105 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 MSI1O43347 362 aaKnown RBP16.08■□□□□ 0.16
C9orf3-217ENST00000479161 ENDOD1O94919 500 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 EGFP01133 1207 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 APOEP02649 317 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 HMBSP08397 361 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 HNRNPH3P31942 346 aaKnown RBP16.08■□□□□ 0.16
C9orf3-217ENST00000479161 CCR1P32246 355 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 CXCL12P48061 93 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 NRLP54845 237 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 ARID5AQ03989 594 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 TRIM14Q14142 442 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 ARID5BQ14865 1188 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 ASIC2Q16515 512 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 SLC25A52Q3SY17 297 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 ACAD10Q6JQN1 1059 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 TERB1Q8NA31 727 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 EZH1Q92800 747 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-217ENST00000479161 ARHGEF4Q9NR80 690 aa16.08■□□□□ 0.16
C9orf3-217ENST00000479161 LUC7L2Q9Y383 392 aaKnown RBP16.08■□□□□ 0.16
C9orf3-217ENST00000479161 CCDC163A0A0D9SF12 145 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 NEDD8-MDP1E9PL57 170 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 SCAMP3O14828 347 aaKnown RBP16.07■□□□□ 0.16
C9orf3-217ENST00000479161 NPC1O15118 1278 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 CISD3P0C7P0 127 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 CHRM1P11229 460 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-217ENST00000479161 TNFAIP3P21580 790 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 FAM133BQ5BKY9 247 aaKnown RBP16.07■□□□□ 0.16
C9orf3-217ENST00000479161 BRMS1LQ5PSV4 323 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 FAM102AQ5T9C2 384 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-217ENST00000479161 PIK3R6Q5UE93 754 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 SPECC1LQ69YQ0 1117 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 TPGS1Q6ZTW0 290 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 MON1BQ7L1V2 547 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 SYT13Q7L8C5 426 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 C12orf40Q86WS4 652 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 CAMKK1Q8N5S9 505 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 ATP6V0D2Q8N8Y2 350 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 C3orf20Q8ND61 904 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 OLIG1Q8TAK6 271 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 ACDQ96AP0 544 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 TMA16Q96EY4 203 aaKnown RBP16.07■□□□□ 0.16
C9orf3-217ENST00000479161 SEMA4AQ9H3S1 761 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 RBM12Q9NTZ6 932 aaKnown RBP16.07■□□□□ 0.16
C9orf3-217ENST00000479161 DDIT4Q9NX09 232 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 ADAM22Q9P0K1 906 aa16.07■□□□□ 0.16
C9orf3-217ENST00000479161 TCRBV5S1A1TA0A578 114 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 SIGLEC16A6NMB1 481 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 PROB1E7EW31 1015 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 TIMM44O43615 452 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 RNF40O75150 1001 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 GYPCP04921 128 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 TDGF1P13385 188 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 KIR2DL1P43626 348 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-217ENST00000479161 SLC6A11P48066 632 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 DGKGP49619 791 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 CXCR3P49682 368 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 KLHL30Q0D2K2 578 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 NAIF1Q69YI7 327 aaPredicted RBP16.06■□□□□ 0.16
C9orf3-217ENST00000479161 GRAMD4Q6IC98 578 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 MMS22LQ6ZRQ5 1243 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 TRMT11Q7Z4G4 463 aaKnown RBP16.06■□□□□ 0.16
C9orf3-217ENST00000479161 SLC30A5Q8TAD4 765 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 USP33Q8TEY7 942 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 HAUS4Q9H6D7 363 aa16.06■□□□□ 0.16
C9orf3-217ENST00000479161 DNAJC17Q9NVM6 304 aaKnown RBP16.06■□□□□ 0.16
C9orf3-217ENST00000479161 M0QYT0 321 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 SERPING1P05155 500 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 SP9P0CG40 484 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 ABCB4P21439 1286 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 HOXD9P28356 352 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-217ENST00000479161 NBL1P41271 181 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 PTPN9P43378 593 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 PITX1P78337 314 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-217ENST00000479161 EIF4HQ15056 248 aaKnown RBP16.05■□□□□ 0.16
C9orf3-217ENST00000479161 ZC3H12AQ5D1E8 599 aaKnown RBP16.05■□□□□ 0.16
C9orf3-217ENST00000479161 MS4A13Q5J8X5 152 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 TTC39BQ5VTQ0 682 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-217ENST00000479161 E4F1Q66K89 784 aaPredicted RBP16.05■□□□□ 0.16
C9orf3-217ENST00000479161 HGSNATQ68CP4 663 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 ZC3H14Q6PJT7 736 aaKnown RBP16.05■□□□□ 0.16
C9orf3-217ENST00000479161 Q6ZS52 159 aa16.05■□□□□ 0.16
C9orf3-217ENST00000479161 ZNF571Q7Z3V5 609 aaPredicted RBP16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms