RNA–Protein interactions for RNA: ENST00000479029.1

PHF1-207, Transcript of PHD finger protein 1, humanhuman

TSL 2

Gene PHF1, Length 933 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF1-207ENST00000479029 ADGRF1Q5T601 910 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 PMF1Q6P1K2 205 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 RRAGAQ7L523 313 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 METTL3Q86U44 580 aaKnown RBP17.36■□□□□ 0.37
PHF1-207ENST00000479029 TRIML1Q8N9V2 468 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 EHBP1Q8NDI1 1231 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 LMO3Q8TAP4 145 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 IRGQQ8WZA9 623 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 GOLGA1Q92805 767 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 TMA16Q96EY4 203 aaKnown RBP17.36■□□□□ 0.37
PHF1-207ENST00000479029 CIPCQ9C0C6 399 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 PRDM16Q9HAZ2 1276 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 STOML2Q9UJZ1 356 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.36■□□□□ 0.37
PHF1-207ENST00000479029 CTNND2Q9UQB3 1225 aa17.36■□□□□ 0.37
PHF1-207ENST00000479029 ASCC3Q8N3C0 2202 aaKnown RBP17.35■□□□□ 0.37
PHF1-207ENST00000479029 M0QYV0 167 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 BIN1O00499 593 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 GIPC1O14908 333 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 TSPAN3O60637 253 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 LATS1O95835 1130 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 IL12RB1P42701 662 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 GCNT1Q02742 428 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 ZNF234Q14588 700 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 SYCP2LQ5T4T6 812 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 SLC41A1Q8IVJ1 513 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 RBBP8NLQ8NC74 664 aaPredicted RBP17.35■□□□□ 0.37
PHF1-207ENST00000479029 FOXJ1Q92949 421 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 KAT5Q92993 513 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 ZNF419Q96HQ0 510 aaPredicted RBP17.35■□□□□ 0.37
PHF1-207ENST00000479029 HSFY1Q96LI6 401 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 HSPA12BQ96MM6 686 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 ZSWIM1Q9BR11 485 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 CACNA1EQ15878 2313 aa17.35■□□□□ 0.37
PHF1-207ENST00000479029 KMT2BQ9UMN6 2715 aaPredicted RBP17.34■□□□□ 0.37
PHF1-207ENST00000479029 PIK3R2O00459 728 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 MSI1O43347 362 aaKnown RBP17.34■□□□□ 0.37
PHF1-207ENST00000479029 FBXO21O94952 628 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 BRD2P25440 801 aaKnown RBP17.34■□□□□ 0.37
PHF1-207ENST00000479029 HOXD9P28356 352 aaPredicted RBP17.34■□□□□ 0.37
PHF1-207ENST00000479029 CD6P30203 668 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 STX17P56962 302 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 KCNH2Q12809 1159 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 PAK1Q13153 545 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 WDR45BQ5MNZ6 344 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 MSANTD2Q6P1R3 559 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 TMPRSS6Q8IU80 811 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 TRIM59Q8IWR1 403 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 UNC45BQ8IWX7 931 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 RGL4Q8IZJ4 473 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 SORCS1Q8WY21 1168 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 GTPBP2Q9BX10 602 aaKnown RBP17.34■□□□□ 0.37
PHF1-207ENST00000479029 SRRTQ9BXP5 876 aaKnown RBP17.34■□□□□ 0.37
PHF1-207ENST00000479029 MKRN2Q9H000 416 aaKnown RBP17.34■□□□□ 0.37
PHF1-207ENST00000479029 CAPN10Q9HC96 672 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 ITM2CQ9NQX7 267 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 USP24Q9UPU5 2620 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 PLXND1Q9Y4D7 1925 aa17.34■□□□□ 0.37
PHF1-207ENST00000479029 UTP18Q9Y5J1 556 aaKnown RBP eCLIP17.34■□□□□ 0.37
PHF1-207ENST00000479029 GADD45BO75293 160 aaPredicted RBP17.33■□□□□ 0.36
PHF1-207ENST00000479029 GABBR2O75899 941 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 FGFR1OPO95684 399 aaKnown RBP17.33■□□□□ 0.36
PHF1-207ENST00000479029 AFPP02771 609 aaKnown RBP17.33■□□□□ 0.36
PHF1-207ENST00000479029 EPHX1P07099 455 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 OXTRP30559 389 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 SLC11A2P49281 568 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 MARSP56192 900 aaKnown RBP17.33■□□□□ 0.36
PHF1-207ENST00000479029 ZNF252P-AS1Q0IIN9 211 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 NUGGCQ68CJ6 796 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 TMEM215Q68D42 235 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 SERPINA13PQ6UXR4 307 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 ARHGEF19Q8IW93 802 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 HDDC3Q8N4P3 179 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 WFIKKN2Q8TEU8 576 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 PRCCQ92733 491 aaPredicted RBP17.33■□□□□ 0.36
PHF1-207ENST00000479029 SIPA1Q96FS4 1042 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 TOE1Q96GM8 510 aaKnown RBP17.33■□□□□ 0.36
PHF1-207ENST00000479029 SLC32A1Q9H598 525 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 CD93Q9NPY3 652 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 SUSD2Q9UGT4 822 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 PLA2G4CQ9UP65 541 aa17.33■□□□□ 0.36
PHF1-207ENST00000479029 ARHGAP33O14559 1287 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 CALCAP01258 141 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 LTFP02788 710 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 SYPP08247 313 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 ACADMP11310 421 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 NCAM1P13591 858 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 KRT5P13647 590 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 GNSP15586 552 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 HLA-FP30511 346 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 TPMTP51580 245 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 ST3GAL2Q16842 350 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 DEFB124Q8NES8 71 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 IRX2Q9BZI1 471 aaPredicted RBP17.32■□□□□ 0.36
PHF1-207ENST00000479029 MIS12Q9H081 205 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 INTS2Q9H0H0 1204 aaKnown RBP17.32■□□□□ 0.36
PHF1-207ENST00000479029 FSCN3Q9NQT6 498 aa17.32■□□□□ 0.36
PHF1-207ENST00000479029 WSB2Q9NYS7 404 aaPredicted RBP17.32■□□□□ 0.36
PHF1-207ENST00000479029 USP36Q9P275 1121 aaKnown RBP17.32■□□□□ 0.36
PHF1-207ENST00000479029 IRAK2O43187 625 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms